RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 CUEDC2Q9H467 287 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF334Q9HCZ1 680 aaPredicted RBP13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 HEBP1Q9NRV9 189 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 OBP2AQ9NY56 170 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 ZMYM5Q9UJ78 669 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF292O60281 2723 aa13.72□□□□□ -0.21
HNRNPC-221ENST00000555883 A0A087X0B3 334 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 ARNTLO00327 626 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 CYB561D2O14569 222 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 LAMTOR5O43504 91 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 CEBPZQ03701 1054 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 KCNA1Q09470 495 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 FZD5Q13467 585 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 TEAD2Q15562 447 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 STXBP4Q6ZWJ1 553 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 DNAJB7Q7Z6W7 309 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 ADSSL1Q8N142 457 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 LRRC52Q8N7C0 313 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 ATAD1Q8NBU5 361 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 SNX21Q969T3 373 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 KBTBD4Q9NVX7 518 aa13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-221ENST00000555883 COL4A2P08572 1712 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 SOBPA7XYQ1 873 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 EXTL3O43909 919 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 LRRN2O75325 713 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 YEATS4O95619 227 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 IDEP14735 1019 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 CASP5P51878 434 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 VEPH1Q14D04 833 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 E2F4Q16254 413 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 DCP1BQ8IZD4 617 aaKnown RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 CACTINQ8WUQ7 758 aaKnown RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 LEO1Q8WVC0 666 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 NELL1Q92832 810 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 TMEM209Q96SK2 561 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 PRMT8Q9NR22 394 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 SPATA6Q9NWH7 488 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 ITGA11Q9UKX5 1188 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 SLC27A5Q9Y2P5 690 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 PCDHGA2Q9Y5H1 932 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 ANK1P16157 1881 aa13.7□□□□□ -0.22
HNRNPC-221ENST00000555883 HEPACAM2A8MVW5 462 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 ZNF263O14978 683 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 SPTLC2O15270 562 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 CHADO15335 359 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 ABCB7O75027 752 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 CD72P21854 359 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 CDC25CP30307 473 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 GDI1P31150 447 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 VIPR2P41587 438 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 AMPD3Q01432 767 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 GRM2Q14416 872 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 STK38Q15208 465 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 ARHGAP15Q53QZ3 475 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 WSCD1Q658N2 575 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 TMEM86AQ8N2M4 240 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 ABCB6Q9NP58 842 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 PATJQ8NI35 1801 aa13.69□□□□□ -0.22
HNRNPC-221ENST00000555883 DCHS1Q96JQ0 3298 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 MIA3Q5JRA6 1907 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 EIF3DO15371 548 aaKnown RBP eCLIP13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 KINO60870 393 aaKnown RBP13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 HAPLN1P10915 354 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 GJA1P17302 382 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 ATF6P18850 670 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 GABRR2P28476 465 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 FOXK2Q01167 660 aa13.68□□□□□ -0.22
HNRNPC-221ENST00000555883 NFE2Q16621 373 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms