RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZKSCAN4Q969J2 545 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 TGS1Q96RS0 853 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 RBM15Q96T37 977 aaKnown RBP eCLIP7.41□□□□□ -1.22
TDP1-213ENST00000555880 CGRRF1Q99675 332 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 XPNPEP1Q9NQW7 623 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 PDLIM7Q9NR12 457 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 PICK1Q9NRD5 415 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.22
TDP1-213ENST00000555880 ANKFY1Q9P2R3 1169 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 R3HDM2Q9Y2K5 976 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 ARL2BPQ9Y2Y0 163 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 STYXL1Q9Y6J8 313 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 SIP14410 1827 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 EXOC1LA0A1B0GW35 172 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ATP2A1O14983 1001 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 MGRN1O60291 552 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 STBD1O95210 358 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 LSM8O95777 96 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 OAS1P00973 400 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 C4BPAP04003 597 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 KRT1P04264 644 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 SUPT20HL2P0C7V6 817 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ATF7P17544 494 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NF2P35240 595 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 AP3M2P53677 418 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 BACE1P56817 501 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 NOP14P78316 857 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 ELF3P78545 371 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 IL9RQ01113 521 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 MCL1Q07820 350 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 SF3A3Q12874 501 aaKnown RBP eCLIP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NFX1Q12986 1120 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NEDD9Q14511 834 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 SUPT20HL1Q3ZLR7 823 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 C2CD6Q53TS8 623 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 EAPPQ56P03 285 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 SPOPLQ6IQ16 392 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 VSTM1Q6UX27 236 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ABHD15Q6UXT9 468 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 TAS1R3Q7RTX0 852 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 GDAP1Q8TB36 358 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 FEZF2Q8TBJ5 459 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 GRAMD1AQ96CP6 724 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 MAGEB18Q96M61 343 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 TEPSINQ96N21 525 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 MYCBPQ99417 103 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NCAPGQ9BPX3 1015 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 PORCNQ9H237 461 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ACAD9Q9H845 621 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 UBN1Q9NPG3 1134 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 ZNF302Q9NR11 478 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 KLHL14Q9P2G3 628 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 CTNNAL1Q9UBT7 734 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 TBK1Q9UHD2 729 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ZNF148Q9UQR1 794 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 A0A1B0GUA9 196 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 FAM47DPA6NHR8 397 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 SPATA31C2B4DYI2 1134 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 RASA4BC9J798 803 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 RASA4O43374 803 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 VNN1O95497 513 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 PIGRP01833 764 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 OATP04181 439 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 RFC5P40937 340 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 MAGEA4P43358 317 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TAS2R40P59535 323 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 COPS2P61201 443 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TAP1Q03518 808 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 NCOA4Q13772 614 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TMED2Q15363 201 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 ZKSCAN8Q15776 578 aaPredicted RBP7.4□□□□□ -1.23
TDP1-213ENST00000555880 PREPLQ4J6C6 727 aaPredicted RBP7.4□□□□□ -1.23
TDP1-213ENST00000555880 LRRC38Q5VT99 294 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 DAB2IPQ5VWQ8 1189 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 CYP4F22Q6NT55 531 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 LLGL2Q6P1M3 1020 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 DNAJC24Q6P3W2 148 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 DCUN1D2Q6PH85 259 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 NUDT18Q6ZVK8 323 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 PNMA8AQ86V59 439 aaPredicted RBP7.4□□□□□ -1.23
TDP1-213ENST00000555880 ZNF280CQ8ND82 737 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TCP11Q8WWU5 503 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TMEM143Q96AN5 459 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 FAM84AQ96KN4 292 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 C9orf72Q96LT7 481 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 FAM118BQ9BPY3 351 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 HERPUD2Q9BSE4 406 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TEX13BQ9BXU2 312 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 MAF1Q9H063 256 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 ECT2Q9H8V3 914 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 PPCSQ9HAB8 311 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 MLXIPLQ9NP71 852 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 SAYSD1Q9NPB0 183 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 ABCF3Q9NUQ8 709 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 DDX56Q9NY93 547 aaKnown RBP7.4□□□□□ -1.23
TDP1-213ENST00000555880 SENP1Q9P0U3 644 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 TPX2Q9ULW0 747 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms