RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PSMC5P62195 406 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 OGDHQ02218 1023 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 SPDYCQ5MJ68 293 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 PYROXD1Q8WU10 500 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 CHURC1Q8WUH1 139 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 TARS2Q9BW92 718 aaKnown RBP17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 WASF2Q9Y6W5 498 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 TTLL13PA6NNM8 815 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 CD19P15391 556 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 BGNP21810 368 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 C7orf43Q8WVR3 580 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 WDR60Q8WVS4 1066 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 AGO4Q9HCK5 861 aaKnown RBP17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZNF862O60290 1169 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 F7P08709 466 aaPredicted RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 CALB2P22676 271 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 GTF2BQ00403 316 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 NR1H3Q13133 447 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 MCUR1Q96AQ8 359 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 CFAP57Q96MR6 1250 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 NXF1Q9UBU9 619 aaKnown RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 GTF2H1P32780 548 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 STAT4Q14765 748 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZNF568Q3ZCX4 644 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ARMC3Q5W041 872 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 CROCCP2Q86T23 111 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ALYREFQ86V81 257 aaKnown RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 PALM2Q8IXS6 379 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 FAM71DQ8N9W8 422 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ARMC2Q8NEN0 867 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 HSPH1Q92598 858 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 RAB3IPQ96QF0 476 aaPredicted RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 TMOD2Q9NZR1 351 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 NUB1Q9Y5A7 615 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 FAM237BA0A1B0GVD1 139 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 PIK3CDO00329 1044 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 GRAP2O75791 330 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 HADHBP55084 474 aaKnown RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 WDR72Q3MJ13 1102 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 RAB6CQ53S08 254 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 EEPD1Q7L9B9 569 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 RBBP8NLQ8NC74 664 aaPredicted RBP17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 PHC3Q8NDX5 983 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 STK32AQ8WU08 396 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 RAB6CQ9H0N0 254 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZFATQ9P243 1243 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 RIPK3Q9Y572 518 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
PPP4R3A-208ENST00000555462 CAPN9O14815 690 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 ATP4AP20648 1035 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 MMP14P50281 582 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 GPX6P59796 221 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 YWHAGP61981 247 aaKnown RBP eCLIP17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 NPNTQ6UXI9 565 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 CCHCR1Q8TD31 782 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZNF483Q8TF39 744 aaPredicted RBP17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 CFAP36Q96G28 342 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 TTC1Q99614 292 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 GYG2O15488 501 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 EDF1O60869 148 aaKnown RBP17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 CST3P01034 146 aaPredicted RBP17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 PODNQ7Z5L7 613 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 FBXO36Q8NEA4 188 aa17.97■□□□□ 0.47
PPP4R3A-208ENST00000555462 CYB561D2O14569 222 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 USP1O94782 785 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 ENO1P06733 434 aaKnown RBP17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 ALADP13716 330 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 GLRA2P23416 452 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 GMPRP36959 345 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 SLC8A3P57103 927 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 KLF1Q13351 362 aaPredicted RBP17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 BMPR2Q13873 1038 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 CLUL1Q15846 466 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 CDO1Q16878 200 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 LIN9Q5TKA1 542 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZCCHC23Q6ZST2 131 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 MAB21L3Q8N8X9 362 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 C12orf50Q8NA57 414 aaPredicted RBP17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 CADM1Q9BY67 442 aaKnown RBP17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 TMX2Q9Y320 296 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 TAF1LQ8IZX4 1826 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 LIASO43766 372 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 RAP1GAPP47736 663 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 VPS72Q15906 364 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 RNF43Q68DV7 783 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 IGDCC3Q8IVU1 814 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 ACTL9Q8TC94 416 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 DNAJC9Q8WXX5 260 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 USP6NLQ92738 828 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 CYP39A1Q9NYL5 469 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 PACSIN3Q9UKS6 424 aa17.96■□□□□ 0.47
PPP4R3A-208ENST00000555462 PCDHB2Q9Y5E7 798 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms