RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PPP1R10Q96QC0 940 aaKnown RBP10.87□□□□□ -0.67
NEK9-205ENST00000555405 ELOVL4Q9GZR5 314 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 TMEM161AQ9NX61 479 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 FAN1Q9Y2M0 1017 aa10.87□□□□□ -0.67
NEK9-205ENST00000555405 ALDH2P05091 517 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 H2AFZP0C0S5 128 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 KCNE1P15382 129 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 DNAJB2P25686 324 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 TUSC3Q13454 348 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 LLGL1Q15334 1064 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 ZBTB6Q15916 424 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 SOWAHAQ2M3V2 549 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 H2AFVQ71UI9 128 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 TFAP2BQ92481 460 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 PCDHB18PQ96TA0 734 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 BZW2Q9Y6E2 419 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 M0QYV0 167 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 ENC1O14682 589 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 KIF4AO95239 1232 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 MOCS3O95396 460 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 GJB6O95452 261 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 OR4Q2P0C623 313 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 SLC18A3Q16572 532 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 CCDC170Q8IYT3 715 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 NT5C1AQ9BXI3 368 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 LUC7LQ9NQ29 371 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 CTTNBP2NLQ9P2B4 639 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 NAGPAQ9UK23 515 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 GTF3C4Q9UKN8 822 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 CLDN5O00501 218 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 FGBP02675 491 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 CCDC130P13994 396 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 GALCP54803 685 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 KIAA1841Q6NSI8 718 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 C1orf131Q8NDD1 294 aaKnown RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 ABHD8Q96I13 439 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 PGLYRP2Q96PD5 576 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 SEZ6LQ9BYH1 1024 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
NEK9-205ENST00000555405 CXXC1Q9P0U4 656 aaPredicted RBP10.86□□□□□ -0.67
NEK9-205ENST00000555405 TRIOBPQ9H2D6 2365 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 KIF5CO60282 957 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 EOMESO95936 686 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 ATICP31939 592 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 GJC1P36383 396 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 NSFP46459 744 aaKnown RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 BPIFB4P59827 614 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 GRIK3Q13003 919 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 CYP4A22Q5TCH4 519 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 FAM171A1Q5VUB5 890 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 MFSD5Q6N075 450 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 NT5DC4Q86YG4 428 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 CTNNBL1Q8WYA6 563 aaPredicted RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 TMEM176AQ96HP8 235 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 SQORQ9Y6N5 450 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 EIF3CLB5ME19 914 aaKnown RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 KRT86O43790 486 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 RFX1P22670 979 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 FMO1Q01740 532 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 REXO1L1PQ8IX06 675 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 ZNF653Q96CK0 615 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 EIF3CQ99613 913 aaKnown RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 MIS12Q9H081 205 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 UBN1Q9NPG3 1134 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 BARX2Q9UMQ3 279 aaPredicted RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 SSU72P8A0A1W2PR75 194 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 PIRO00625 290 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 NRP1O14786 923 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 RAD23BP54727 409 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 SGO2Q562F6 1265 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 METTL23Q86XA0 190 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 SYN2Q92777 582 aaPredicted RBP10.85□□□□□ -0.67
NEK9-205ENST00000555405 THAP2Q9H0W7 228 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 HESX1Q9UBX0 185 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 DERAQ9Y315 318 aa10.85□□□□□ -0.67
NEK9-205ENST00000555405 PMM2O15305 246 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 GRAP2O75791 330 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
NEK9-205ENST00000555405 AMHP03971 560 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 CHRNB2P17787 502 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 EPHB4P54760 987 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 CDR2Q01850 454 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 FPGSQ05932 587 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 DENND1BQ6P3S1 775 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms