RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CRHR2Q13324 411 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 TSHZ3Q63HK5 1081 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 Q6ZRM9 215 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 BEND5Q7L4P6 421 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 CERS3Q8IU89 383 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 CFAP52Q8N1V2 620 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 FAM46DQ8NEK8 389 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 OR56A1Q8NGH5 318 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 MARS2Q96GW9 593 aaKnown RBP6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 MED15Q96RN5 788 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 TLR10Q9BXR5 811 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 MYO1AQ9UBC5 1043 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 XPR1Q9UBH6 696 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 CEP83Q9Y592 693 aa6.55□□□□□ -1.36
CKS1BP1-201ENST00000555221 TRIM24O15164 1050 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 TCEA3O75764 348 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 MT-ND5P03915 603 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 ABCB4P21439 1286 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 FGFR2P21802 821 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 FDXRP22570 491 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 APOBEC3AP31941 199 aaPredicted RBP6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 PPM1AP35813 382 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 SCNN1GP51170 649 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 SATB1Q01826 763 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 PMS2P11Q13670 270 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZRSR2Q15696 482 aaKnown RBP6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 ARL13BQ3SXY8 428 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 FAM83BQ5T0W9 1011 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 DCAF12L1Q5VU92 463 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 ERICH6BQ5W0A0 696 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 METRNLQ641Q3 311 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 FOXR2Q6PJQ5 311 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 TSHZ1Q6ZSZ6 1077 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 RNF44Q7L0R7 432 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 SPSB4Q96A44 273 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 KIAA1191Q96A73 305 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 TRIB1Q96RU8 372 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 WDR12Q9GZL7 423 aaKnown RBP6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 MS4A7Q9GZW8 240 aaPredicted RBP6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZSCAN32Q9NX65 697 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 HESX1Q9UBX0 185 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 JAG2Q9Y219 1238 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 TCAF1Q9Y4C2 921 aa6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 USP15Q9Y4E8 981 aaPredicted RBP6.54□□□□□ -1.36
CKS1BP1-201ENST00000555221 XDHP47989 1333 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 CCDC195A0A1B0GUA6 201 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 INMTO95050 263 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 TECP42680 631 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 CARSP49589 748 aaKnown RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 RNASE9P60153 205 aaKnown RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 DHX8Q14562 1220 aaKnown RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 ICAM4Q14773 271 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 TAPT1Q6NXT6 567 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 UNC13DQ70J99 1090 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 SKAP1Q86WV1 359 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 YAF2Q8IY57 180 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 OR56A3Q8NH54 315 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 POF1BQ8WVV4 589 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 NEU1Q99519 415 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 HEPHQ9BQS7 1158 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 STK31Q9BXU1 1019 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 EIF2AQ9BY44 585 aaKnown RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 DEF6Q9H4E7 631 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 PTPRHQ9HD43 1115 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 AURKAIP1Q9NWT8 199 aaPredicted RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 ETAA1Q9NY74 926 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 RNF181Q9P0P0 153 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 ITGB1BP2Q9UKP3 347 aa6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
CKS1BP1-201ENST00000555221 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 A0A1B0GTW7 788 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 CLCA1A8K7I4 914 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 RASSF9O75901 435 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 SOAT2O75908 522 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 FOSP01100 380 aaPredicted RBP6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 TXNP10599 105 aaKnown RBP6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 HARSP12081 509 aaKnown RBP6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 SELENOPP49908 381 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 MAPK10P53779 464 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 IQCB1Q15051 598 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 GDF7Q7Z4P5 450 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 TXLNBQ8N3L3 684 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 FANCBQ8NB91 859 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 TMEM41AQ96HV5 264 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 ADOQ96SZ5 270 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 CRB3Q9BUF7 120 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 CHST8Q9H2A9 424 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 CD248Q9HCU0 757 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 SHOC2Q9UQ13 582 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 CHST2Q9Y4C5 530 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 PCDHGB2Q9Y5G2 931 aa6.52□□□□□ -1.37
CKS1BP1-201ENST00000555221 TMEM233B4DJY2 109 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms