RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SPTLC1O15269 473 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 P4HA2O15460 535 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 LRRN2O75325 713 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 HLA-DRAP01903 254 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 AFPP02771 609 aaKnown RBP11.69□□□□□ -0.54
SHMT2-218ENST00000555213 SLC9A1P19634 815 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 CASP14P31944 242 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 MYL6P60660 151 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 APBA1Q02410 837 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
SHMT2-218ENST00000555213 WDR72Q3MJ13 1102 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 TCEAL5Q5H9L2 206 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 ZNF667Q5HYK9 610 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
SHMT2-218ENST00000555213 KIAA0319Q5VV43 1072 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 SCARA3Q6AZY7 606 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 OVOS1Q6IE37 1185 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 CD300LGQ6UXG3 332 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 C15orf39Q6ZRI6 1047 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 TAS1R1Q7RTX1 841 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 THEM5Q8N1Q8 247 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 TMEM86AQ8N2M4 240 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 TMEM130Q8N3G9 435 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 FBXL13Q8NEE6 735 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 CPLX3Q8WVH0 158 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 GDAP2Q9NXN4 497 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 MTRRQ9UBK8 725 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 CAPN11Q9UMQ6 739 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 STXBP5LQ9Y2K9 1186 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
SHMT2-218ENST00000555213 HIDE1A8MVS5 230 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 GOLGA6L6A8MZA4 724 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PMM2O15305 246 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 CYP11A1P05108 521 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 FECHP22830 423 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 KLRC2P26717 231 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PON1P27169 355 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 NRIP1P48552 1158 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 FMO5P49326 533 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 GSDMDP57764 484 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 NOP14P78316 857 aaKnown RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 DUSP6Q16828 381 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 CBWD6Q4V339 395 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 CBWD3Q5JTY5 395 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 CBWD5Q5RIA9 395 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 DPH6Q7L8W6 267 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 RBM23Q86U06 439 aaKnown RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 ADGRF2Q8IZF7 708 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 TAS1R2Q8TE23 839 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 DNAI2Q9GZS0 605 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 DPP7Q9UHL4 492 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 PCDHGC5Q9Y5F6 944 aa11.68□□□□□ -0.54
SHMT2-218ENST00000555213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHMT2-218ENST00000555213 GTPBP10A4D1E9 387 aaKnown RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 OR6C75A6NL08 312 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 AKR1B15C9JRZ8 316 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 PES1O00541 588 aaKnown RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 TEX28O15482 410 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 OAZ2O95190 189 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 VNN1O95497 513 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 GLUD1P00367 558 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 ASS1P00966 412 aaKnown RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 CNPP09543 421 aaKnown RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 CPB1P15086 417 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 IGFBP6P24592 240 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 LHX1P48742 406 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 WSCD1Q658N2 575 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 WDR59Q6PJI9 974 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 PDCL2Q8N4E4 241 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 BAP1Q92560 729 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 CRACR2AQ9BSW2 395 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 XYLT2Q9H1B5 865 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 GANQ9H2C0 597 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 SNX25Q9H3E2 840 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 RAB20Q9NX57 234 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 ZKSCAN5Q9Y2L8 839 aa11.67□□□□□ -0.54
SHMT2-218ENST00000555213 TIMM13Q9Y5L4 95 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-218ENST00000555213 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms