RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 PHACTR2O75167 634 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 WEE2P0C1S8 567 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 STX17P56962 302 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 PPP3CAQ08209 521 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 TRPC3Q13507 836 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 SOWAHAQ2M3V2 549 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 TPGS2Q68CL5 300 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 CES5AQ6NT32 575 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 ZNF707Q96C28 371 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-217ENST00000555116 CEP63Q96MT8 703 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 NECAB3Q96P71 396 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-217ENST00000555116 TMEM209Q96SK2 561 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 RHOBTB2Q9BYZ6 727 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 ZDHHC7Q9NXF8 308 aa15.27■□□□□ 0.03
SHMT2-217ENST00000555116 DOCK8Q8NF50 2099 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 CCDC195A0A1B0GUA6 201 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 VNN2O95498 520 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 C8AP07357 584 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 OR4Q2P0C623 313 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 ATF2P15336 505 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 ATICP31939 592 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 NCOA4Q13772 614 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 RBM43Q6ZSC3 357 aaKnown RBP15.26■□□□□ 0.03
SHMT2-217ENST00000555116 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 OSTM1Q86WC4 334 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 TMEM86AQ8N2M4 240 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 MLKLQ8NB16 471 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 SPATA18Q8TC71 538 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 MED15Q96RN5 788 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 VRTNQ9H8Y1 702 aa15.26■□□□□ 0.03
SHMT2-217ENST00000555116 AFF4Q9UHB7 1163 aaKnown RBP15.26■□□□□ 0.03
SHMT2-217ENST00000555116 GABRDO14764 452 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 SEC24AO95486 1093 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 CPB1P15086 417 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 GTF2H1P32780 548 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 MTHFRP42898 656 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 GCLMP48507 274 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 GPR17Q13304 367 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 CBX2Q14781 532 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-217ENST00000555116 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 CCDC183Q5T5S1 534 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 DPH6Q7L8W6 267 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 THEM5Q8N1Q8 247 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 SLC7A14Q8TBB6 771 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 PRKD2Q9BZL6 878 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 ZCWPW1Q9H0M4 648 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 C5orf42Q9H799 3197 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 PTPRDP23468 1912 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHMT2-217ENST00000555116 NLRP12P59046 1061 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 ATAT1Q5SQI0 421 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 RTL10Q7L3V2 364 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 ADGRF2Q8IZF7 708 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 RIPOR3Q96MK2 946 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 RWDD2AQ9UIY3 292 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 MAFFQ9ULX9 164 aa15.25■□□□□ 0.03
SHMT2-217ENST00000555116 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 A0A0C4DFX4 3053 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 HOXA9P31269 272 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ZP2Q05996 745 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ADCY1Q08828 1119 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ZNF699Q32M78 642 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 DPCR1Q3MIW9 517 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 WDR72Q3MJ13 1102 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 FRMD5Q7Z6J6 570 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 SMG7Q92540 1137 aaKnown RBP15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 NECTIN4Q96NY8 510 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 COL25A1Q9BXS0 654 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-217ENST00000555116 TMEM8AQ9HCN3 771 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ARMCX3Q9UH62 379 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-217ENST00000555116 POLIQ9UNA4 740 aa15.24■□□□□ 0.03
SHMT2-217ENST00000555116 ASS1P00966 412 aaKnown RBP15.23■□□□□ 0.03
SHMT2-217ENST00000555116 POU2F2P09086 479 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 WARSP23381 471 aaKnown RBP15.23■□□□□ 0.03
SHMT2-217ENST00000555116 ELF1P32519 619 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 LHX1P48742 406 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 SGSM1Q2NKQ1 1148 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 PGLYRP2Q96PD5 576 aa15.23■□□□□ 0.03
SHMT2-217ENST00000555116 UHRF1Q96T88 793 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-217ENST00000555116 MRPL45Q9BRJ2 306 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms