RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 MTUS1Q9ULD2 1270 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 L1RE1Q9UN81 338 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 STXBP5LQ9Y2K9 1186 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 PTPRSQ13332 1948 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ANK1P16157 1881 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 CITO14578 2027 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ITIH6Q6UXX5 1313 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 RALGAPA2Q2PPJ7 1873 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 GRM6O15303 877 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 TBC1D4O60343 1298 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 ADCY5O95622 1261 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 CXCL14O95715 111 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 CTSAP10619 480 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 ACO1P21399 889 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 DNAJB1P25685 340 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 TKTP29401 623 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 GLUD2P49448 558 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 ERVFC1P60507 584 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 POLR2FP61218 127 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 INCA1Q0VD86 236 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 CAMK1Q14012 370 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 PTPN21Q16825 1174 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 RTP2Q5QGT7 225 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 OVOS1Q6IE37 1185 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 TMC7Q7Z402 723 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 ADGRF2Q8IZF7 708 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 CRYBG2Q8N1P7 616 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 UBR7Q8N806 425 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 MRPL43Q8N983 215 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 OR6B3Q8NGW1 331 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 PIK3R5Q8WYR1 880 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 KAT5Q92993 513 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 ARID3AQ99856 593 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 LMAN2LQ9H0V9 348 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 SDCBP2Q9H190 292 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 SMYD3Q9H7B4 428 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 NGRNQ9NPE2 291 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 MRPL17Q9NRX2 175 aaKnown RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 BARX2Q9UMQ3 279 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-215ENST00000554997 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 IRAK3Q9Y616 596 aa10.9□□□□□ -0.66
SYNE2-215ENST00000554997 A0A1W2PQJ5 194 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 A8MXQ7 604 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 FOXN3O00409 490 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 FSCN2O14926 492 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 EPHB6O15197 1021 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 CILPO75339 1184 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 PDGFRBP09619 1106 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 TRIM21P19474 475 aaKnown RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 LMO2P25791 158 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 RAP1GAPP47736 663 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 DRAP1Q14919 205 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 ARHGAP44Q17R89 818 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 HABP4Q5JVS0 413 aaKnown RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 CACNA2D4Q7Z3S7 1137 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 MICAL1Q8TDZ2 1067 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 WHAMMQ8TF30 809 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 SHC3Q92529 594 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 TMEM176AQ96HP8 235 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 B3GALT6Q96L58 329 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 RTP3Q9BQQ7 232 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 TTYH3Q9C0H2 523 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 DNAI2Q9GZS0 605 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 ZBP1Q9H171 429 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 TLR9Q9NR96 1032 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 DDX43Q9NXZ2 648 aaKnown RBP10.89□□□□□ -0.67
SYNE2-215ENST00000554997 CEP72Q9P209 647 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 FNIP2Q9P278 1114 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 KIAA1257Q9ULG3 409 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 MYO6Q9UM54 1294 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 CAPN11Q9UMQ6 739 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
SYNE2-215ENST00000554997 OR6C75A6NL08 312 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
SYNE2-215ENST00000554997 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
SYNE2-215ENST00000554997 URODP06132 367 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
SYNE2-215ENST00000554997 CD58P19256 250 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 PCSK1P29120 753 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 CDC25BP30305 580 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 STAT1P42224 750 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 NDST1P52848 882 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 RAD23BP54727 409 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 JAM2P57087 298 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 CREMQ03060 361 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 TBX2Q13207 712 aaPredicted RBP10.88□□□□□ -0.67
SYNE2-215ENST00000554997 SMC1AQ14683 1233 aaKnown RBP10.88□□□□□ -0.67
SYNE2-215ENST00000554997 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
SYNE2-215ENST00000554997 SLC8B1Q6J4K2 584 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms