RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ATAD1Q8NBU5 361 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZBTB44Q8NCP5 570 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 OR10T2Q8NGX3 314 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF512Q96ME7 567 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 TRMT61BQ9BVS5 477 aaKnown RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 CHRDQ9H2X0 955 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 PARVGQ9HBI0 331 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 KCNG1Q9UIX4 513 aa11.46□□□□□ -0.57
SHMT2-215ENST00000554656 NDRG2Q9UN36 371 aaKnown RBP11.46□□□□□ -0.57
SHMT2-215ENST00000554656 ZNF638Q14966 1978 aaKnown RBP11.46□□□□□ -0.58
SHMT2-215ENST00000554656 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.58
SHMT2-215ENST00000554656 A0A1W2PRU2 124 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 OR6C75A6NL08 312 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 HEPACAM2A8MVW5 462 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 KINO60870 393 aaKnown RBP11.45□□□□□ -0.58
SHMT2-215ENST00000554656 PSMC3P17980 439 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 TYMPP19971 482 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 UBA7P41226 1012 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 GTF2BQ00403 316 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 FOXK2Q01167 660 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 FAM160A1Q05DH4 1040 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 GPR17Q13304 367 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 GAS6Q14393 721 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 IQCEQ6IPM2 695 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 CENPPQ6IPU0 288 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 DSTYKQ6XUX3 929 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 GAREM2Q75VX8 874 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
SHMT2-215ENST00000554656 LEMD2Q8NC56 503 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 RUBCNQ92622 972 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 CALML4Q96GE6 196 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 NELL2Q99435 816 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 TRPV5Q9NQA5 729 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 SLC27A5Q9Y2P5 690 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 PCDHGA2Q9Y5H1 932 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
SHMT2-215ENST00000554656 PIAS3Q9Y6X2 628 aa11.45□□□□□ -0.58
SHMT2-215ENST00000554656 SPTBN2O15020 2390 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 PIRO00625 290 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 PPP1R37O75864 691 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 SOX9P48436 509 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ACOT2P49753 483 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 WNT7BP56706 349 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 MYBPC2Q14324 1141 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 TMEM132DQ14C87 1099 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 KYAT1Q16773 422 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 CRELD2Q6UXH1 353 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 USP37Q86T82 979 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 SFR1Q86XK3 245 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 MFSD6LQ8IWD5 586 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 EFCAB13Q8IY85 973 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 FSIP1Q8NA03 581 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ZSWIM2Q8NEG5 633 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ENGASEQ8NFI3 743 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 LARP4BQ92615 738 aaKnown RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 IRF7Q92985 503 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 EPSTI1Q96J88 318 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 TIGD1Q96MW7 591 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 HINFPQ9BQA5 517 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 GZF1Q9H116 711 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 NUP62CLQ9H1M0 184 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ZHX3Q9H4I2 956 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ZSCAN32Q9NX65 697 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 MRPS17Q9Y2R5 130 aaKnown RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-215ENST00000554656 STYXL1Q9Y6J8 313 aa11.44□□□□□ -0.58
SHMT2-215ENST00000554656 ANAPC1Q9H1A4 1944 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 XPOTO43592 962 aaKnown RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 TBCAO75347 108 aaKnown RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 CYP11A1P05108 521 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 CHRNB1P11230 501 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ODC1P11926 461 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ATF6P18850 670 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 SCP2P22307 547 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ADSSP30520 456 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 EPHB3P54753 998 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 KCNA1Q09470 495 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 RESP18Q5W5W9 173 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 SCARA3Q6AZY7 606 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 DNAJB7Q7Z6W7 309 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ARID3BQ8IVW6 561 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms