RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TMEM86AQ8N2M4 240 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 TMEM105Q8N8V8 129 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 PRSS33Q8NF86 280 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 FLCNQ8NFG4 579 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 GPR152Q8TDT2 470 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 SCFD1Q8WVM8 642 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 ING5Q8WYH8 240 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 SHDQ96IW2 340 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 PGLYRP2Q96PD5 576 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 RPP25Q9BUL9 199 aaKnown RBP9.4□□□□□ -0.9
ACTN1-213ENST00000554508 GPR88Q9GZN0 384 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 SCAND2PQ9GZW5 306 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-213ENST00000554508 INTS13Q9NVM9 706 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 GDAP2Q9NXN4 497 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 YIPF1Q9Y548 306 aa9.4□□□□□ -0.9
ACTN1-213ENST00000554508 WDFY4Q6ZS81 3184 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 PIEZO1Q92508 2521 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 NUP210Q8TEM1 1887 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 FAM237AA0A1B0GTK4 181 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 A0A1B0GVL5 298 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 KRBA1A5PL33 1030 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 STK25O00506 426 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TGFB1I1O43294 461 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 FGF19O95750 216 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 KRT19P08727 400 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CEBPBP17676 345 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 RFX1P22670 979 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CASP1P29466 404 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 HOXD11P31277 338 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 WNT7BP56706 349 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 MYL7Q01449 175 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TSPY1Q01534 308 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TCF15Q12870 199 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 MYO1EQ12965 1108 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 WSCD1Q658N2 575 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CWF19L1Q69YN2 538 aaKnown RBP9.39□□□□□ -0.91
ACTN1-213ENST00000554508 DPH6Q7L8W6 267 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ITIH5Q86UX2 942 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 WDR49Q8IV35 697 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 C12orf56Q8IXR9 622 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 XXYLT1Q8NBI6 393 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ATAD1Q8NBU5 361 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 OR10T2Q8NGX3 314 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 GOLGA5Q8TBA6 731 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 SPPL2BQ8TCT7 592 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 PSMG2Q969U7 264 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ELSPBP1Q96BH3 223 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TCEAL4Q96EI5 215 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 PAGE5Q96GU1 130 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 TMEM209Q96SK2 561 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ACBD6Q9BR61 282 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CRISPLD1Q9H336 500 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ZFP14Q9HCL3 533 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 AGPAT3Q9NRZ7 376 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CA14Q9ULX7 337 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 HPSEQ9Y251 543 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 SLC27A5Q9Y2P5 690 aa9.39□□□□□ -0.91
ACTN1-213ENST00000554508 CLIC2O15247 247 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 KLRC4O43908 158 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 MOSPD3O75425 235 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 MYL4P12829 197 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 PFKFB1P16118 471 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 CCR2P41597 374 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 SYKP43405 635 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 LHX1P48742 406 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 CYP2J2P51589 502 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 STARD6P59095 220 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 GPC5P78333 572 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 PRKCQQ04759 706 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 BFSP1Q12934 665 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 PSMD6Q15008 389 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 SNRNP35Q16560 246 aaKnown RBP9.38□□□□□ -0.91
ACTN1-213ENST00000554508 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-213ENST00000554508 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
ACTN1-213ENST00000554508 SLC44A4Q53GD3 710 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 TANGO2Q6ICL3 276 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 DNAJB7Q7Z6W7 309 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-213ENST00000554508 TMC8Q8IU68 726 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 NELFCDQ8IXH7 590 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 PDCL2Q8N4E4 241 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 TMEM174Q8WUU8 243 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 SMARCD2Q92925 531 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 CCDC47Q96A33 483 aaKnown RBP9.38□□□□□ -0.91
ACTN1-213ENST00000554508 E2F7Q96AV8 911 aa9.38□□□□□ -0.91
ACTN1-213ENST00000554508 HPDLQ96IR7 371 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms