RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PRDM12Q9H4Q4 367 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 ABCB6Q9NP58 842 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 PRDM9Q9NQV7 894 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 ITM2CQ9NQX7 267 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 ECHDC1Q9NTX5 307 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 NKIRAS2Q9NYR9 191 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-206ENST00000554429 HECAQ9UBI9 543 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-206ENST00000554429 STK39Q9UEW8 545 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 ADD3Q9UEY8 706 aaKnown RBP2.92□□□□□ -1.94
PRPF39-206ENST00000554429 SLC27A5Q9Y2P5 690 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 PLXNA3P51805 1871 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 DENND4AQ7Z401 1863 aa2.92□□□□□ -1.94
PRPF39-206ENST00000554429 TRIP12Q14669 1992 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-206ENST00000554429 CYP2D7A0A087X1C5 515 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ANO9A1A5B4 782 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 A6NNZ2 444 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 C9IYK1 514 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 MASP2O00187 686 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FOXP2O15409 715 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SLC7A4O43246 635 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RTN2O75298 545 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CYP11A1P05108 521 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PDHA1P08559 390 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 C6orf222P0C671 652 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CYP2C18P33260 490 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SOX5P35711 763 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 STAT1P42224 750 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NLRP5P59047 1200 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FUT2Q10981 343 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PSMD6Q15008 389 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PDCD2Q16342 344 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DDR2Q16832 855 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 INTS11Q5TA45 600 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 METTL11BQ5VVY1 283 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SLFN13Q68D06 897 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NAIF1Q69YI7 327 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RAB12Q6IQ22 244 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CAVIN1Q6NZI2 390 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ISLR2Q6UXK2 745 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ATCAYQ86WG3 371 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PLEKHM2Q8IWE5 1019 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 LRRC47Q8N1G4 583 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CNTD1Q8N815 330 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SPERTQ8NA61 448 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 BBOF1Q8ND07 529 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FBXO27Q8NI29 283 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 GOLGA5Q8TBA6 731 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RASGRP4Q8TDF6 673 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SLC7A3Q8WY07 619 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CTNNBL1Q8WYA6 563 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SHC3Q92529 594 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 HDAC2Q92769 488 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NINJ1Q92982 152 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TRIM63Q969Q1 353 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 OSBP2Q969R2 916 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DHTKD1Q96HY7 919 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 UBXN10Q96LJ8 280 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TRERF1Q96PN7 1200 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PRRX2Q99811 253 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 MYLK2Q9H1R3 596 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TNKS2Q9H2K2 1166 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DCTPP1Q9H773 170 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SLC28A3Q9HAS3 691 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RNF146Q9NTX7 359 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NOP53Q9NZM5 478 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DNMT3LQ9UJW3 386 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PTBP2Q9UKA9 531 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 HPCAL4Q9UM19 191 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TCF20Q9UGU0 1960 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 EMSYQ7Z589 1322 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 A0A1B0GVC2 190 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 EPOPA6NHQ4 379 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 MINDY4BA8MYZ0 360 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 B2RBV5 119 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 AP3B1O00203 1094 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CACNB4O00305 520 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ZSCAN9O15535 394 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 THAP12O43422 761 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 STX6O43752 255 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ZBTB14O43829 449 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NEMFO60524 1076 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TLR5O60602 858 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SOCS5O75159 536 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FAM13AO94988 1023 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 GOSR1O95249 250 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CNOT4O95628 575 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 THEGLP0DJG4 465 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RDXP35241 583 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ID4P47928 161 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SULT1E1P49888 294 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ARFIP1P53367 373 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 YBEYP58557 167 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 BEX3Q00994 111 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 GRB10Q13322 594 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NEDD9Q14511 834 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 KCNB1Q14721 858 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 LLGL1Q15334 1064 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TAF5Q15542 800 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms