RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CGRRF1Q99675 332 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 ZCWPW1Q9H0M4 648 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 KCNK12Q9HB15 430 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 HCFC1R1Q9NWW0 138 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 GDAP2Q9NXN4 497 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 DNMT3BQ9UBC3 853 aaKnown RBP14.06□□□□□ -0.16
SHMT2-211ENST00000554310 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
SHMT2-211ENST00000554310 MTMR11A4FU01 709 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 HUS1O60921 280 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 VNN2O95498 520 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 RHOP08100 348 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 DLATP10515 647 aaKnown RBP14.05□□□□□ -0.16
SHMT2-211ENST00000554310 PTPN2P17706 415 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 COL9A1P20849 921 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 FAM160A1Q05DH4 1040 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 TWF1Q12792 350 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 TDGQ13569 410 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 HFE2Q6ZVN8 426 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 TMEM86AQ8N2M4 240 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 PDCL2Q8N4E4 241 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 LEMD2Q8NC56 503 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
SHMT2-211ENST00000554310 FGF13Q92913 245 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-211ENST00000554310 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 MFSD14AQ96MC6 490 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 PGLYRP2Q96PD5 576 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 L1RE1Q9UN81 338 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 DUSP12Q9UNI6 340 aa14.05□□□□□ -0.16
SHMT2-211ENST00000554310 MRPS23Q9Y3D9 190 aaKnown RBP14.05□□□□□ -0.16
SHMT2-211ENST00000554310 ANHXE9PGG2 379 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 CALUO43852 315 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-211ENST00000554310 NR3C1P04150 777 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 TNNI1P19237 187 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 UBE2HP62256 183 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 HTR4Q13639 388 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 ZSCAN23Q3MJ62 389 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 CENPPQ6IPU0 288 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 MTSS1LQ765P7 747 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 PDZD4Q76G19 769 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-211ENST00000554310 TRAPPC11Q7Z392 1133 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 NPAS3Q8IXF0 933 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 TOP6BLQ8N6T0 577 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 ITFG1Q8TB96 612 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 CCDC127Q96BQ5 260 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 HPDLQ96IR7 371 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 RTP3Q9BQQ7 232 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 ASAH2Q9NR71 780 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 KMT2EQ8IZD2 1858 aa14.04□□□□□ -0.16
SHMT2-211ENST00000554310 ZNF197O14709 1029 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 MICAL2O94851 1124 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 AP3M2P53677 418 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 EPHB3P54753 998 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 EPHA5P54756 1037 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 MYL7Q01449 175 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 TSPY1Q01534 308 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 DUSP4Q13115 394 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 SLC5A9Q2M3M2 681 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 SLC39A12Q504Y0 691 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 CYP4A22Q5TCH4 519 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 DPH6Q7L8W6 267 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 DCP1BQ8IZD4 617 aaKnown RBP14.03□□□□□ -0.16
SHMT2-211ENST00000554310 ADGRF2Q8IZF7 708 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 GUF1Q8N442 669 aaKnown RBP14.03□□□□□ -0.16
SHMT2-211ENST00000554310 ATAD1Q8NBU5 361 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 ENGASEQ8NFI3 743 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 SPPL2BQ8TCT7 592 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 PBXIP1Q96AQ6 731 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-211ENST00000554310 TMEM209Q96SK2 561 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 CORO1BQ9BR76 489 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 CRISPLD1Q9H336 500 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 SMOC2Q9H3U7 446 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 DMAC2Q9NW81 257 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 GDE1Q9NZC3 331 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 CEP72Q9P209 647 aa14.03□□□□□ -0.16
SHMT2-211ENST00000554310 HOOK1Q9UJC3 728 aaKnown RBP14.03□□□□□ -0.16
SHMT2-211ENST00000554310 GADD45BO75293 160 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 ALDH1A3P47895 512 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 LHX1P48742 406 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 TUFMP49411 452 aaKnown RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 CLDN10P78369 228 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 NFE2Q16621 373 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 NFIL3Q16649 462 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 PRSS36Q5K4E3 855 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 LIMS2Q7Z4I7 341 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms