RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DEF6Q9H4E7 631 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 MARCH5Q9NX47 278 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 SPG21Q9NZD8 308 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 AJAP1Q9UKB5 411 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-210ENST00000553950 KIAA1257Q9ULG3 409 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 L1RE1Q9UN81 338 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
SHMT2-210ENST00000553950 MYH10P35580 1976 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 SSU72P8A0A1W2PR75 194 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 H0YGN5 161 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 FOXN3O00409 490 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-210ENST00000553950 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
SHMT2-210ENST00000553950 WEE2P0C1S8 567 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 GNA15P30679 374 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 ZNF132P52740 706 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 CREMQ03060 361 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 KRT17Q04695 432 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 YWHAHQ04917 246 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-210ENST00000553950 BMS1Q14692 1282 aaKnown RBP15.47■□□□□ 0.07
SHMT2-210ENST00000553950 SHHQ15465 462 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 MAPRE1Q15691 268 aaKnown RBP15.47■□□□□ 0.07
SHMT2-210ENST00000553950 TIGD5Q53EQ6 642 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 ZNF280DQ6N043 979 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 PPP1R2P3Q6NXS1 205 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 GPR65Q8IYL9 337 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 SLC39A11Q8N1S5 342 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 OR6B3Q8NGW1 331 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 HASPINQ8TF76 798 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 KAT5Q92993 513 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 IGSF21Q96ID5 467 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 CACNG4Q9UBN1 327 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 CEP83Q9Y592 693 aa15.47■□□□□ 0.07
SHMT2-210ENST00000553950 PLXNA4Q9HCM2 1894 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 A8MXQ7 604 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 H7C4K7 107 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 GABRDO14764 452 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 CYLC1P35663 651 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-210ENST00000553950 BRCC3P46736 316 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 RAP1GAPP47736 663 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 TSPY1Q01534 308 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 C9orf50Q5SZB4 431 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 OVOS1Q6IE37 1185 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 TRIM72Q6ZMU5 477 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 ANKS3Q6ZW76 656 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 TMCO2Q7Z6W1 182 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-210ENST00000553950 LRRC8AQ8IWT6 810 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 EPS8L1Q8TE68 723 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 TMEM176AQ96HP8 235 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 SDCBP2Q9H190 292 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
SHMT2-210ENST00000553950 CDH9Q9ULB4 789 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 PTPRDP23468 1912 aa15.46■□□□□ 0.07
SHMT2-210ENST00000553950 ATP8B3O60423 1300 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 ARHGAP6O43182 974 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 SOD2P04179 222 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 ITGB1P05556 798 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 VDRP11473 427 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 FGFR3P22607 806 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 GNL1P36915 607 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 NDST1P52848 882 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 ARID5AQ03989 594 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 UBE3AQ05086 875 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 USP41Q3LFD5 358 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 WSCD1Q658N2 575 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 TDHQ8IZJ6 230 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 TMEM130Q8N3G9 435 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 TXLNBQ8N3L3 684 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 KBTBD7Q8WVZ9 684 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 CCDC42Q96M95 316 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 ACBD6Q9BR61 282 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 MRPL45Q9BRJ2 306 aaKnown RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 TTPALQ9BTX7 342 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 DDX43Q9NXZ2 648 aaKnown RBP15.45■□□□□ 0.06
SHMT2-210ENST00000553950 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 MSRAQ9UJ68 235 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 LZTS1Q9Y250 596 aa15.45■□□□□ 0.06
SHMT2-210ENST00000553950 OR6C75A6NL08 312 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 CYP26A1O43174 497 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 THAP12O43422 761 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 OAZ2O95190 189 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 URODP06132 367 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 RB1P06400 928 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 CYP11B1P15538 503 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 CTNNB1P35222 781 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 RAD23BP54727 409 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 CDH8P55286 799 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 PLCB3Q01970 1234 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 SMARCB1Q12824 385 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 SGO2Q562F6 1265 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 SCARA3Q6AZY7 606 aa15.44■□□□□ 0.06
SHMT2-210ENST00000553950 KIAA1841Q6NSI8 718 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms