RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 UBXN4Q92575 508 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 DPF2Q92785 391 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 OSBPL9Q96SU4 736 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 VPS16Q9H269 839 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 TUBA8Q9NY65 449 aaPredicted RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 ZBTB21Q9ULJ3 1066 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 APOBEC2Q9Y235 224 aaKnown RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 PCDHB1Q9Y5F3 818 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 A0A0B4J269 797 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 SMIM35A0A1B0GVV1 85 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 EBLN1P0CF75 366 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 SNHG28P0DPA3 235 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 MYCLP1P12525 358 aaPredicted RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 POLGP54098 1239 aaPredicted RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 TUBB3Q13509 450 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 PREPLQ4J6C6 727 aaPredicted RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 TAPT1Q6NXT6 567 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 CATSPERGQ6ZRH7 1159 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 ZNF365Q70YC5 407 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 ZNF551Q7Z340 670 aaPredicted RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 HMCESQ96FZ2 354 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 ZC3H10Q96K80 434 aaKnown RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 CAMKK2Q96RR4 588 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 CCM2LQ9NUG4 571 aaPredicted RBP3.2□□□□□ -1.9
SRP54-204ENST00000553923 DNAJC28Q9NX36 388 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 DNM3Q9UQ16 869 aa3.2□□□□□ -1.9
SRP54-204ENST00000553923 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.2□□□□□ -1.9
SRP54-204ENST00000553923 CCDC187A0A096LP49 1063 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 CDC45O75419 566 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 FAM163BP0C2L3 166 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 OSMP13725 252 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 ZNF280AP59817 542 aaPredicted RBP3.19□□□□□ -1.9
SRP54-204ENST00000553923 PIGFQ07326 219 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 BMPR2Q13873 1038 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 ATP2B3Q16720 1220 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 MIDNQ504T8 468 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 DDX46Q7L014 1031 aaKnown RBP3.19□□□□□ -1.9
SRP54-204ENST00000553923 MEPCEQ7L2J0 689 aaKnown RBP3.19□□□□□ -1.9
SRP54-204ENST00000553923 GALNT16Q8N428 558 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 FAM109AQ8N4B1 249 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 SLC17A8Q8NDX2 589 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 ADAMTS15Q8TE58 950 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 NRG4Q8WWG1 115 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 SSH1Q8WYL5 1049 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 TBC1D5Q92609 795 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 FKBP10Q96AY3 582 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 TRIB1Q96RU8 372 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 DMRTA2Q96SC8 542 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 C7orf25Q9BPX7 421 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 IMPG2Q9BZV3 1241 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 EBF3Q9H4W6 596 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 ZNF277Q9NRM2 450 aaPredicted RBP3.19□□□□□ -1.9
SRP54-204ENST00000553923 SH3BP4Q9P0V3 963 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 NR2E3Q9Y5X4 410 aa3.19□□□□□ -1.9
SRP54-204ENST00000553923 BCAR3O75815 825 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 NCLP19338 710 aaKnown RBP3.18□□□□□ -1.9
SRP54-204ENST00000553923 MMP13P45452 471 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 STRN3Q13033 797 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 RABEP1Q15276 862 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 PLAC9Q5JTB6 97 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 DLK2Q6UY11 383 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 RHOT1Q8IXI2 618 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 C8orf58Q8NAV2 365 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 RAB24Q969Q5 203 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 MRGPRX4Q96LA9 322 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 SLC2A13Q96QE2 648 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 SERHLQ9NQF3 203 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 ARHGEF3Q9NR81 526 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 C14orf119Q9NWQ9 140 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 ETAA1Q9NY74 926 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 AFG3L2Q9Y4W6 797 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 GPR45Q9Y5Y3 372 aa3.18□□□□□ -1.9
SRP54-204ENST00000553923 ANKRD62A6NC57 917 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 KCNU1A8MYU2 1149 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 F5H697 171 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 H0YIZ8 118 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 TRIAP1O43715 76 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 DNAJB5O75953 348 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 NDUFV1P49821 464 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 CDC42EP1Q00587 391 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 TRIP6Q15654 476 aaKnown RBP3.17□□□□□ -1.9
SRP54-204ENST00000553923 TBCCQ15814 346 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 AARS2Q5JTZ9 985 aaKnown RBP3.17□□□□□ -1.9
SRP54-204ENST00000553923 ANKRD16Q6P6B7 361 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 IRF2BP2Q7Z5L9 587 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 VCPIP1Q96JH7 1222 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 TMX3Q96JJ7 454 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 PACSIN1Q9BY11 444 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 TPSD1Q9BZJ3 242 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 SMOC2Q9H3U7 446 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 MRPS18AQ9NVS2 196 aaKnown RBP3.17□□□□□ -1.9
SRP54-204ENST00000553923 DLL3Q9NYJ7 618 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 INTUQ9ULD6 942 aa3.17□□□□□ -1.9
SRP54-204ENST00000553923 E5RJQ4 531 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 SMIM22K7EJ46 135 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 ANXA1P04083 346 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 AGXTP21549 392 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 TOB1P50616 345 aaPredicted RBP3.16□□□□□ -1.9
SRP54-204ENST00000553923 FAPQ12884 760 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 Q4G0T1 1027 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms