RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PCYT2Q99447 389 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 EXOC1LA0A1B0GW35 172 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 POC1B-GALNT4F8VUJ3 575 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 GOLGA8SH3BPF8 625 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 GOLGA8MH3BSY2 632 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 CHUKO15111 745 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 SPAG7O75391 227 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 STAM2O75886 525 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 CETN2P41208 172 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 MTM1Q13496 603 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 SMTNL2Q2TAL5 461 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 PNMA8AQ86V59 439 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-211ENST00000553882 CDR2LQ86X02 465 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-211ENST00000553882 TMEM121Q9BTD3 319 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 C10orf88Q9H8K7 445 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 CISHQ9NSE2 258 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
ACTN1-211ENST00000553882 ADCY3O60266 1144 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ATG7O95352 703 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ZBTB7AO95365 584 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ASS1P00966 412 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 PECAM1P16284 738 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 DYNLT1P63172 113 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TFAMQ00059 246 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ZCCHC9Q8N567 271 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TAB3Q8N5C8 712 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 CCDC63Q8NA47 563 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 BBOF1Q8ND07 529 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 CKAP2Q8WWK9 683 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 THOC1Q96FV9 657 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 NKIRAS1Q9NYS0 192 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 KCNG1Q9UIX4 513 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ZNF112Q9UJU3 913 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 BANF1O75531 89 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TJP3O95049 919 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 OAS1P00973 400 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ZNF132P52740 706 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 ELF3P78545 371 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 FAM47EQ6ZV65 393 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TRIM50Q86XT4 487 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 RCOR2Q8IZ40 523 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 LRRC71Q8N4P6 559 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 TFAP2BQ92481 460 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 RBM41Q96IZ5 413 aaKnown RBP15.39■□□□□ 0.05
ACTN1-211ENST00000553882 C12orf42Q96LP6 360 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 CCDC77Q9BR77 488 aa15.39■□□□□ 0.05
ACTN1-211ENST00000553882 C19orf81C9J6K1 198 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 ATP2A1O14983 1001 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 TCEA3O75764 348 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 PIAS1O75925 651 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 FARP2O94887 1054 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 SUN1O94901 812 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 RDXP35241 583 aaKnown RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 STAT5BP51692 787 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 STAT4Q14765 748 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 E2F5Q15329 346 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 KCNT1Q5JUK3 1230 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 SPOCD1Q6ZMY3 1216 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 SPATA21Q7Z572 469 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 BRSK2Q8IWQ3 736 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 HOXC10Q9NYD6 342 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 TJP2Q9UDY2 1190 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 BAIAP2L1Q9UHR4 511 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 SGK1O00141 431 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 DNALI1O14645 258 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 TCF7P36402 384 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 ORC1Q13415 861 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 WDR72Q3MJ13 1102 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 DLK2Q6UY11 383 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 ARHGEF18Q6ZSZ5 1173 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 ZBED8Q8IZ13 594 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 NIFKQ9BYG3 293 aaKnown RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 VPS37BQ9H9H4 285 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
ACTN1-211ENST00000553882 LGALS13Q9UHV8 139 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 LCTP09848 1927 aa15.38■□□□□ 0.05
ACTN1-211ENST00000553882 FAM189A1O60320 539 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 MSCO60682 206 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 GJB1P08034 283 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-211ENST00000553882 LY6KQ17RY6 165 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 THNSL1Q8IYQ7 743 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 WDTC1Q8N5D0 677 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 ALLCQ8N6M5 410 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 RNF149Q8NC42 400 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TMEM35BQ8NCS4 154 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TBC1D31Q96DN5 1066 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 ZWILCHQ9H900 591 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 TOM1L1O75674 476 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 CALB1P05937 261 aa15.37■□□□□ 0.05
ACTN1-211ENST00000553882 GCAP28676 217 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms