RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 NDST1P52848 882 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 RAD23BP54727 409 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 DEFB103AP81534 67 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 CDR2Q01850 454 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 TIGD5Q53EQ6 642 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ZNF394Q53GI3 561 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 TAF3Q5VWG9 929 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 GLYCTKQ8IVS8 523 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 LNX1Q8TBB1 728 aaPredicted RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 NT5C1AQ9BXI3 368 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ELOVL4Q9GZR5 314 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 KCND1Q9NSA2 647 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 PUF60Q9UHX1 559 aaKnown RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 PPP2R2CQ9Y2T4 447 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 ZNF263O14978 683 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 THAP12O43422 761 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 KIF4AO95239 1232 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 CALCAP01258 141 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 ALDH2P05091 517 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 MMEP08473 750 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 SYN1P17600 705 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 GNL1P36915 607 aaPredicted RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 OR1G1P47890 313 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 FMO1Q01740 532 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 CYP27A1Q02318 531 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 CD300LGQ6UXG3 332 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 ADGRF2Q8IZF7 708 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 PDCL2Q8N4E4 241 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 SLC4A11Q8NBS3 891 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 OR6B3Q8NGW1 331 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 SLC30A5Q8TAD4 765 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 OLIG1Q8TAK6 271 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 KBTBD7Q8WVZ9 684 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 DPF3Q92784 378 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 TMEM175Q9BSA9 504 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 DNAI2Q9GZS0 605 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 HMGXB4Q9UGU5 601 aa12.53□□□□□ -0.4
NEK9-202ENST00000553823 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 REXO2Q9Y3B8 237 aaKnown RBP12.53□□□□□ -0.4
NEK9-202ENST00000553823 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 A8MXQ7 604 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 M0QZQ0 153 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 ITGB1P05556 798 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 ODC1P11926 461 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 CD19P15391 556 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.41
NEK9-202ENST00000553823 MAGEA1P43355 309 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 BRCC3P46736 316 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 EPHB4P54760 987 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 CCDC122Q5T0U0 273 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 C10orf76Q5T2E6 689 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 ALKBH5Q6P6C2 394 aaKnown RBP12.52□□□□□ -0.41
NEK9-202ENST00000553823 TRIM72Q6ZMU5 477 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 KIAA1328Q86T90 577 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 SPATA18Q8TC71 538 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 ZNF606Q8WXB4 792 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
NEK9-202ENST00000553823 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
NEK9-202ENST00000553823 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEK9-202ENST00000553823 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 DSEQ9UL01 958 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 KIAA1257Q9ULG3 409 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 NENFQ9UMX5 172 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 FAN1Q9Y2M0 1017 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
NEK9-202ENST00000553823 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 TSC2P49815 1807 aa12.52□□□□□ -0.41
NEK9-202ENST00000553823 VWA8A3KMH1 1905 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms