RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 YWHAHQ04917 246 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-204ENST00000553605 RAB44Q7Z6P3 723 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-204ENST00000553605 TSTD1Q8NFU3 115 aa15.1■□□□□ 0.01
PRPF39-204ENST00000553605 EXOC4Q96A65 974 aa15.1■□□□□ 0.01
PRPF39-204ENST00000553605 C18orf25Q96B23 403 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-204ENST00000553605 LRIG1Q96JA1 1093 aa15.1■□□□□ 0.01
PRPF39-204ENST00000553605 AIFM3Q96NN9 605 aa15.1■□□□□ 0.01
PRPF39-204ENST00000553605 OXCT2Q9BYC2 517 aaPredicted RBP15.1■□□□□ 0.01
PRPF39-204ENST00000553605 AGXT2Q9BYV1 514 aa15.1■□□□□ 0.01
PRPF39-204ENST00000553605 CCDC86Q9H6F5 360 aaKnown RBP15.1■□□□□ 0.01
PRPF39-204ENST00000553605 OAZ2O95190 189 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 KCNE1P15382 129 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.014e-6■■□□□ 13.2
PRPF39-204ENST00000553605 FAM193AP78312 1265 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 PSMD2Q13200 908 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 GPR17Q13304 367 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 ZNF423Q2M1K9 1284 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 BLOC1S2Q6QNY1 142 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 ITIH5Q86UX2 942 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 JAKMIP1Q96N16 626 aaKnown RBP15.09■□□□□ 0.01
PRPF39-204ENST00000553605 SLC46A2Q9BY10 475 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 TNFSF13BQ9Y275 285 aa15.09■□□□□ 0.01
PRPF39-204ENST00000553605 CACNA1EQ15878 2313 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 EFNA5P52803 228 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 NAIF1Q69YI7 327 aaPredicted RBP15.08■□□□□ 0
PRPF39-204ENST00000553605 CMTM8Q8IZV2 173 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 HDDC3Q8N4P3 179 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 EZH1Q92800 747 aaPredicted RBP15.08■□□□□ 0
PRPF39-204ENST00000553605 NACC1Q96RE7 527 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 KIFC3Q9BVG8 833 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
PRPF39-204ENST00000553605 TMEM74BQ9NUR3 256 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 CACNA2D2Q9NY47 1150 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 TBX20Q9UMR3 447 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 TIMM13Q9Y5L4 95 aaPredicted RBP15.08■□□□□ 0
PRPF39-204ENST00000553605 CELSR3Q9NYQ7 3312 aa15.08■□□□□ 0
PRPF39-204ENST00000553605 BPTFQ12830 3046 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 SOAT2O75908 522 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 ARSAP15289 507 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 CDC25CP30307 473 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 GJA4P35212 333 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 ATXN3P54252 364 aaPredicted RBP15.07■□□□□ 0
PRPF39-204ENST00000553605 EVCP57679 992 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 C19orf57Q0VDD7 668 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 PPP2R5AQ15172 486 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 ANO7Q6IWH7 933 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 SLC23A3Q6PIS1 610 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 LPCAT2Q7L5N7 544 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 RASSF3Q86WH2 238 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 SYT12Q8IV01 421 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 ATAD1Q8NBU5 361 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 ACAP3Q96P50 834 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 GCNAQ96QF7 691 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 CDT1Q9H211 546 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 CNTN3Q9P232 1028 aa15.07■□□□□ 0
PRPF39-204ENST00000553605 MBD1Q9UIS9 605 aaPredicted RBP15.07■□□□□ 0
PRPF39-204ENST00000553605 MTMR11A4FU01 709 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 OR6C75A6NL08 312 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 K7ERI5 159 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 M0QZQ0 153 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 TNFRSF10BO14763 440 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 CPLX1O14810 134 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 RPS6KB1P23443 525 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 HNRNPDQ14103 355 aaKnown RBP15.06■□□□□ 0
PRPF39-204ENST00000553605 ZNF568Q3ZCX4 644 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
PRPF39-204ENST00000553605 USP37Q86T82 979 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 TTC9BQ8N6N2 239 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 CD101Q93033 1021 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 CNOT6LQ96LI5 555 aaKnown RBP15.06■□□□□ 0
PRPF39-204ENST00000553605 IL21Q9HBE4 155 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 SCUBE2Q9NQ36 999 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 ZMYM5Q9UJ78 669 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 CCL26Q9Y258 94 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 RAXQ9Y2V3 346 aa15.06■□□□□ 0
PRPF39-204ENST00000553605 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 MAP3K13O43283 966 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 SPATA31C1P0DKV0 1188 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 CYP11B2P19099 503 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 AVPR1AP37288 418 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 TXKP42681 527 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 BFSP1Q12934 665 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 PDGFRLQ15198 375 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 CALCRLQ16602 461 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 EARS2Q5JPH6 523 aaKnown RBP15.05■□□□□ -0
PRPF39-204ENST00000553605 PADI6Q6TGC4 694 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 CCNI2Q6ZMN8 369 aaPredicted RBP15.05■□□□□ -0
PRPF39-204ENST00000553605 ARMCX6Q7L4S7 300 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 TMEFF1Q8IYR6 380 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 MDGA1Q8NFP4 955 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 CCDC26Q8TAB7 109 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 MDM1Q8TC05 714 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 OXER1Q8TDS5 423 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 USP13Q92995 863 aaPredicted RBP15.05■□□□□ -0
PRPF39-204ENST00000553605 IFT74Q96LB3 600 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 ACO2Q99798 780 aaKnown RBP15.05■□□□□ -0
PRPF39-204ENST00000553605 LPIN3Q9BQK8 851 aa15.05■□□□□ -0
PRPF39-204ENST00000553605 GTPBP2Q9BX10 602 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms