RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 C11orf74Q86VG3 221 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ANKRD13CQ8N6S4 541 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 CNTD1Q8N815 330 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 KIAA1958Q8N8K9 716 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ERO1AQ96HE7 468 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 P2RX7Q99572 595 aaKnown RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ELF4Q99607 663 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 ASPSCR1Q9BZE9 553 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 METTL14Q9HCE5 456 aaKnown RBP5.47□□□□□ -1.53
ATXN3-222ENST00000553570 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 SPO11Q9Y5K1 396 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 NCANO14594 1321 aa5.47□□□□□ -1.53
ATXN3-222ENST00000553570 COL2A1P02458 1487 aaPredicted RBP5.46□□□□□ -1.53
ATXN3-222ENST00000553570 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 PRRG2O14669 202 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 TLR2O60603 784 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 HIP1RO75146 1068 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 PTPN1P18031 435 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 CHMLP26374 656 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 PSMC4P43686 418 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 KIF11P52732 1056 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 USP14P54578 494 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 NKX3-2P78367 333 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 ICA1Q05084 483 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 ITKQ08881 620 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 ZNF174Q15697 407 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 BTBD8Q5XKL5 378 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 CTU1Q7Z7A3 348 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 TRIM48Q8IWZ4 208 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 SLC5A5Q92911 643 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 CEP89Q96ST8 783 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 PARK7Q99497 189 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 VTA1Q9NP79 307 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 G3BP2Q9UN86 482 aaKnown RBP5.46□□□□□ -1.54
ATXN3-222ENST00000553570 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 AGTPBP1Q9UPW5 1226 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
ATXN3-222ENST00000553570 RLFQ13129 1914 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-222ENST00000553570 A0A1W2PRG0 241 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 B8ZZF3 427 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ACOT7O00154 380 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 NMT2O60551 498 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ULK1O75385 1050 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 FLOT1O75955 427 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-222ENST00000553570 HOXD10P28358 340 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 PTH1RQ03431 593 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 GRIN1Q05586 938 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 GABPAQ06546 454 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 TRDNQ13061 729 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 TERF2Q15554 542 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ALX1Q15699 326 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ODR4Q5SWX8 454 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 BROXQ5VW32 411 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 CC2D1AQ6P1N0 951 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-222ENST00000553570 CLRN3Q8NCR9 226 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 RAET1EQ8TD07 263 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 COA7Q96BR5 231 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-222ENST00000553570 ARHGAP39Q9C0H5 1083 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 MS4A5Q9H3V2 200 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 PCIF1Q9H4Z3 704 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 RIC8BQ9NVN3 520 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 PCNTO95613 3336 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
ATXN3-222ENST00000553570 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATXN3-222ENST00000553570 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-222ENST00000553570 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-222ENST00000553570 F5H6K3 240 aa5.44□□□□□ -1.54
ATXN3-222ENST00000553570 GABRDO14764 452 aa5.44□□□□□ -1.54
ATXN3-222ENST00000553570 TNPO2O14787 897 aaKnown RBP5.44□□□□□ -1.54
ATXN3-222ENST00000553570 TTLL1O95922 423 aa5.44□□□□□ -1.54
ATXN3-222ENST00000553570 ZNF28P17035 718 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms