RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 VNN1O95497 513 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 MBD3O95983 291 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 PIK3CAP42336 1068 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 TNNC1P63316 161 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 PPP3CAQ08209 521 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 ADCY1Q08828 1119 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 ZNF699Q32M78 642 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 DCAF17Q5H9S7 520 aaPredicted RBP24.49■■□□□ 1.51
TDP1-206ENST00000553569 ATAT1Q5SQI0 421 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 TCERG1LQ5VWI1 586 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 TPGS2Q68CL5 300 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 CCDC149Q6ZUS6 474 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 SV2AQ7L0J3 742 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 OSTM1Q86WC4 334 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 TMEM86AQ8N2M4 240 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 SYAP1Q96A49 352 aaPredicted RBP24.49■■□□□ 1.51
TDP1-206ENST00000553569 ELMO3Q96BJ8 720 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 COL25A1Q9BXS0 654 aaPredicted RBP24.49■■□□□ 1.51
TDP1-206ENST00000553569 POMKQ9H5K3 350 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 PIDD1Q9HB75 910 aa24.49■■□□□ 1.51
TDP1-206ENST00000553569 NXF1Q9UBU9 619 aaKnown RBP24.49■■□□□ 1.51
TDP1-206ENST00000553569 CCL16O15467 120 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 ATF2P15336 505 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 SP100P23497 879 aaPredicted RBP24.48■■□□□ 1.51
TDP1-206ENST00000553569 ATICP31939 592 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 CDR1P51861 262 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 ENPEPQ07075 957 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 SOWAHAQ2M3V2 549 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 WDR72Q3MJ13 1102 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 CCDC40Q4G0X9 1142 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 C15orf39Q6ZRI6 1047 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 ZNF707Q96C28 371 aaPredicted RBP24.48■■□□□ 1.51
TDP1-206ENST00000553569 CEP63Q96MT8 703 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 NECTIN4Q96NY8 510 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 XYLT2Q9H1B5 865 aa24.48■■□□□ 1.51
TDP1-206ENST00000553569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.48■■□□□ 1.51
TDP1-206ENST00000553569 DDX43Q9NXZ2 648 aaKnown RBP24.48■■□□□ 1.51
TDP1-206ENST00000553569 AFF4Q9UHB7 1163 aaKnown RBP24.48■■□□□ 1.51
TDP1-206ENST00000553569 DENND4AQ7Z401 1863 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 SEC24AO95486 1093 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 HLA-DRAP01903 254 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 ACAT1P24752 427 aaKnown RBP24.47■■□□□ 1.51
TDP1-206ENST00000553569 ZP2Q05996 745 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 SLC39A12Q504Y0 691 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 ADHFE1Q8IWW8 467 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 MLKLQ8NB16 471 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 PHF7Q9BWX1 381 aaPredicted RBP24.47■■□□□ 1.51
TDP1-206ENST00000553569 PRKD2Q9BZL6 878 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 ZCWPW1Q9H0M4 648 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 PRKAG3Q9UGI9 489 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 ARMCX3Q9UH62 379 aaPredicted RBP24.47■■□□□ 1.51
TDP1-206ENST00000553569 POLIQ9UNA4 740 aa24.47■■□□□ 1.51
TDP1-206ENST00000553569 HCRTO43612 131 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 STAU1O95793 577 aaKnown RBP24.46■■□□□ 1.51
TDP1-206ENST00000553569 HNRNPA1P09651 372 aaKnown RBP eCLIP24.46■■□□□ 1.51
TDP1-206ENST00000553569 MYL7Q01449 175 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 GPR17Q13304 367 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 DPCR1Q3MIW9 517 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 ZNF667Q5HYK9 610 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 SCARA5Q6ZMJ2 495 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 RPGRIP1Q96KN7 1286 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 TMEM8AQ9HCN3 771 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 RWDD2AQ9UIY3 292 aa24.46■■□□□ 1.51
TDP1-206ENST00000553569 MTMR11A4FU01 709 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 VNN2O95498 520 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 HOXA9P31269 272 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 SSTR3P32745 418 aaPredicted RBP24.45■■□□□ 1.5
TDP1-206ENST00000553569 MXI1P50539 228 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 NLRP12P59046 1061 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 TSPY1Q01534 308 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 UVSSAQ2YD98 709 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 FOXR2Q6PJQ5 311 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 DPH6Q7L8W6 267 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 FILIP1Q7Z7B0 1213 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 TCEAL8Q8IYN2 117 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 SPATA18Q8TC71 538 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 TAS1R2Q8TE23 839 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 KBTBD7Q8WVZ9 684 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 MRPL45Q9BRJ2 306 aaKnown RBP24.45■■□□□ 1.5
TDP1-206ENST00000553569 PI4K2AQ9BTU6 479 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 INSL5Q9Y5Q6 135 aa24.45■■□□□ 1.5
TDP1-206ENST00000553569 STX10O60499 249 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 XYLBO75191 536 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 LRG1P02750 347 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 GTF2H1P32780 548 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 LHX1P48742 406 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 KRT39Q6A163 491 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 SPOPLQ6IQ16 392 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 CYP26C1Q6V0L0 522 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 LIMS2Q7Z4I7 341 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 LRRTM3Q86VH5 581 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 ATAD1Q8NBU5 361 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 SRRTQ9BXP5 876 aaKnown RBP24.44■■□□□ 1.5
TDP1-206ENST00000553569 IMPG2Q9BZV3 1241 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 CRISPLD1Q9H336 500 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 SMYD3Q9H7B4 428 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 VRTNQ9H8Y1 702 aa24.44■■□□□ 1.5
TDP1-206ENST00000553569 METTL14Q9HCE5 456 aaKnown RBP24.44■■□□□ 1.5
TDP1-206ENST00000553569 CLUHO75153 1309 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 GABRDO14764 452 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms