RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SLC39A12Q504Y0 691 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 HFE2Q6ZVN8 426 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 C12orf56Q8IXR9 622 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 ELMOD1Q8N336 334 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 LRRC52Q8N7C0 313 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 ATAD1Q8NBU5 361 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 CXorf38Q8TB03 319 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 PBXIP1Q96AQ6 731 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 ZNF512Q96ME7 567 aaPredicted RBP25.39■■□□□ 1.66
TDP1-205ENST00000553527 RTP3Q9BQQ7 232 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 CRISPLD1Q9H336 500 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 EPS15L1Q9UBC2 864 aa25.39■■□□□ 1.66
TDP1-205ENST00000553527 MRPS23Q9Y3D9 190 aaKnown RBP25.39■■□□□ 1.66
TDP1-205ENST00000553527 HUS1O60921 280 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 VNN2O95498 520 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 PTMSP20962 102 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 CASP4P49662 377 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 PSMD6Q15008 389 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 FGF13Q92913 245 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 HPDLQ96IR7 371 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 KCTD10Q9H3F6 313 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 CLSTN2Q9H4D0 955 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 CDH7Q9ULB5 785 aa25.38■■□□□ 1.65
TDP1-205ENST00000553527 MTMR11A4FU01 709 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 SOAT2O75908 522 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 POU2F2P09086 479 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 MYO1EQ12965 1108 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 TDGQ13569 410 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 IQCEQ6IPM2 695 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 CENPPQ6IPU0 288 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 TRAPPC11Q7Z392 1133 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 UBALD2Q8IYN6 164 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 PDCL2Q8N4E4 241 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 SMARCE1Q969G3 411 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 CGRRF1Q99675 332 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 ZCWPW1Q9H0M4 648 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 CEP72Q9P209 647 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 IGSF9Q9P2J2 1179 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 MAFFQ9ULX9 164 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 YIPF1Q9Y548 306 aa25.37■■□□□ 1.65
TDP1-205ENST00000553527 PDXKO00764 312 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 KIF20AO95235 890 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 CST3P01034 146 aaPredicted RBP25.36■■□□□ 1.65
TDP1-205ENST00000553527 NR3C1P04150 777 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 CAMK4Q16566 473 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 SLC5A9Q2M3M2 681 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 CEP135Q66GS9 1140 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 HS6ST3Q8IZP7 471 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 TTC9BQ8N6N2 239 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 ZNF516Q92618 1163 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 ERCC4Q92889 916 aaPredicted RBP25.36■■□□□ 1.65
TDP1-205ENST00000553527 MCRS1Q96EZ8 462 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 MFSD14AQ96MC6 490 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 NUP62CLQ9H1M0 184 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 RMND1Q9NWS8 449 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 L1RE1Q9UN81 338 aa25.36■■□□□ 1.65
TDP1-205ENST00000553527 CALUO43852 315 aaPredicted RBP25.35■■□□□ 1.65
TDP1-205ENST00000553527 MYL4P12829 197 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 ACAT1P24752 427 aaKnown RBP25.35■■□□□ 1.65
TDP1-205ENST00000553527 ALDH1A3P47895 512 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 KCNB1Q14721 858 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 CYP4A22Q5TCH4 519 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 LRRTM3Q86VH5 581 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 SMYD4Q8IYR2 804 aaPredicted RBP25.35■■□□□ 1.65
TDP1-205ENST00000553527 TCEAL4Q96EI5 215 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 SEPT5Q99719 369 aaPredicted RBP25.35■■□□□ 1.65
TDP1-205ENST00000553527 DDX43Q9NXZ2 648 aaKnown RBP25.35■■□□□ 1.65
TDP1-205ENST00000553527 PCDHA5Q9Y5H7 936 aa25.35■■□□□ 1.65
TDP1-205ENST00000553527 NARSO43776 548 aaKnown RBP25.34■■□□□ 1.65
TDP1-205ENST00000553527 PHACTR2O75167 634 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 CLSTN1O94985 981 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 EPHB3P54753 998 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 MGAT5BQ3V5L5 792 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 PDZD4Q76G19 769 aaPredicted RBP25.34■■□□□ 1.65
TDP1-205ENST00000553527 SLC44A3Q8N4M1 653 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 ASIC4Q96FT7 647 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 GSDMAQ96QA5 445 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 MMS19Q96T76 1030 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 RPP25Q9BUL9 199 aaKnown RBP25.34■■□□□ 1.65
TDP1-205ENST00000553527 DMAC2Q9NW81 257 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 GDAP2Q9NXN4 497 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 ZFP37Q9Y6Q3 630 aaPredicted RBP25.34■■□□□ 1.65
TDP1-205ENST00000553527 NUMBLQ9Y6R0 609 aa25.34■■□□□ 1.65
TDP1-205ENST00000553527 TRPC3Q13507 836 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 SOWAHAQ2M3V2 549 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 PARM1Q6UWI2 310 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 SLC9A9Q8IVB4 645 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 NPAS3Q8IXF0 933 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 DCP1BQ8IZD4 617 aaKnown RBP25.33■■□□□ 1.65
TDP1-205ENST00000553527 ADGRF2Q8IZF7 708 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 FAM200AQ8TCP9 573 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 PLEKHO2Q8TD55 490 aa25.33■■□□□ 1.65
TDP1-205ENST00000553527 GZF1Q9H116 711 aaPredicted RBP25.33■■□□□ 1.65
TDP1-205ENST00000553527 ABI2Q9NYB9 513 aaPredicted RBP25.33■■□□□ 1.65
TDP1-205ENST00000553527 HCRTO43612 131 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 PDGFBP01127 241 aaPredicted RBP25.32■■□□□ 1.64
TDP1-205ENST00000553527 GJA1P17302 382 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 CEBPBP17676 345 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 MYL7Q01449 175 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 TSPY1Q01534 308 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms