RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ATP13A4Q4VNC1 1196 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 BSNDQ8WZ55 320 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 BICD1Q96G01 975 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 DCLRE1BQ9H816 532 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 C17orf75Q9HAS0 396 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 PARVAQ9NVD7 372 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 TMOD2Q9NZR1 351 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 SHOC2Q9UQ13 582 aa18.52■□□□□ 0.55
SYNE3-202ENST00000553340 DRG1Q9Y295 367 aaKnown RBP18.52■□□□□ 0.55
SYNE3-202ENST00000553340 ENTPD5O75356 428 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 CFHP08603 1231 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 SFNP31947 248 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 GEMIN4P57678 1058 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 RNASEH2BQ5TBB1 312 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 ANO7Q6IWH7 933 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 PPP1R2P3Q6NXS1 205 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 HLA-DRAP01903 254 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 KRT1P04264 644 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 LINGO3P0C6S8 592 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 TNNI1P19237 187 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 GNA15P30679 374 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 PIK3CAP42336 1068 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 MRPS35P82673 323 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 MCL1Q07820 350 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 MFSD7Q6UXD7 560 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 CLNKQ7Z7G1 428 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 MTDHQ86UE4 582 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 TTC8Q8TAM2 541 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 ZNF483Q8TF39 744 aaPredicted RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 FNBP1Q96RU3 617 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 ADAM33Q9BZ11 813 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 SPATS2LQ9NUQ6 558 aaKnown RBP18.51■□□□□ 0.55
SYNE3-202ENST00000553340 ANKFY1Q9P2R3 1169 aa18.51■□□□□ 0.55
SYNE3-202ENST00000553340 ABLIM1O14639 778 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 FGFR1P11362 822 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ZACNQ401N2 412 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 EFHC2Q5JST6 749 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 LMBRD2Q68DH5 695 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ANO5Q75V66 913 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 PCDHB4Q9Y5E5 795 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 EIF4E1BA6NMX2 242 aaKnown RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ZBED4O75132 1171 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ACADSP16219 412 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ACO1P21399 889 aaKnown RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 CAP2P40123 477 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 PTGER2P43116 358 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 VCPP55072 806 aaKnown RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 KRT76Q01546 638 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 SPOPLQ6IQ16 392 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 TMEM270Q6UE05 265 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 SAMD3Q8N6K7 520 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 DNAJC9Q8WXX5 260 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 YIPF3Q9GZM5 350 aa18.5■□□□□ 0.55
SYNE3-202ENST00000553340 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-202ENST00000553340 ATP9AO75110 1047 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 CCNE2O96020 404 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 EIF2AK2P19525 551 aaKnown RBP18.49■□□□□ 0.55
SYNE3-202ENST00000553340 ATP4AP20648 1035 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-202ENST00000553340 PHBP35232 272 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
SYNE3-202ENST00000553340 CUL2Q13617 745 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 MAPK6Q16659 721 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 NLRX1Q86UT6 975 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 FETUBQ9UGM5 382 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 ADRA1DP25100 572 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 SOX10P56693 466 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 CLDN10P78369 228 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 PLCB3Q01970 1234 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 HIF1AQ16665 826 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 CTC1Q2NKJ3 1217 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 SPOCD1Q6ZMY3 1216 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 RBBP8NLQ8NC74 664 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-202ENST00000553340 SUPT20HQ8NEM7 779 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 CEP170P1Q96L14 293 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 PCDH9Q9HC56 1237 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 STOML1Q9UBI4 398 aa18.49■□□□□ 0.55
SYNE3-202ENST00000553340 SGK1O00141 431 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 EXTL3O43909 919 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 CCDC22O60826 627 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 IFNB1P01574 187 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 ITGAVP06756 1048 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 RPL7AP62424 266 aaKnown RBP18.48■□□□□ 0.55
SYNE3-202ENST00000553340 PSMD6Q15008 389 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 OASLQ15646 514 aaKnown RBP18.48■□□□□ 0.55
SYNE3-202ENST00000553340 PLEKHG4Q58EX7 1191 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 ZC3H12AQ5D1E8 599 aaKnown RBP18.48■□□□□ 0.55
SYNE3-202ENST00000553340 LRRC38Q5VT99 294 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 TDRD10Q5VZ19 366 aaKnown RBP18.48■□□□□ 0.55
SYNE3-202ENST00000553340 C4orf50Q6ZRC1 276 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 PCGF5Q86SE9 256 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 ANKMY2Q8IV38 441 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
SYNE3-202ENST00000553340 TUBB6Q9BUF5 446 aa18.48■□□□□ 0.55
SYNE3-202ENST00000553340 RABGEF1Q9UJ41 708 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms