RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 PNOCQ13519 176 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 PDCD11Q14690 1871 aaKnown RBP16.49■□□□□ 0.23
SHMT2-204ENST00000553324 CYP4A22Q5TCH4 519 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-204ENST00000553324 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 TRIM67Q6ZTA4 783 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 GET4Q7L5D6 327 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-204ENST00000553324 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 ACBD6Q9BR61 282 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 ZCWPW1Q9H0M4 648 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 KCNK12Q9HB15 430 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 CDH7Q9ULB5 785 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 TCHHQ07283 1943 aa16.49■□□□□ 0.23
SHMT2-204ENST00000553324 MTCL1Q9Y4B5 1905 aaKnown RBP16.49■□□□□ 0.23
SHMT2-204ENST00000553324 IKBKBO14920 756 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 RHOP08100 348 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 ATICP31939 592 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 EPHB3P54753 998 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 CLDN10P78369 228 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 ENPEPQ07075 957 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 TWF1Q12792 350 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 TDGQ13569 410 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 NFE2Q16621 373 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-204ENST00000553324 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-204ENST00000553324 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 SPATA20Q8TB22 786 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 PGLYRP2Q96PD5 576 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 MYADMQ96S97 322 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 GDE1Q9NZC3 331 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 MAPK8IP1Q9UQF2 711 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
SHMT2-204ENST00000553324 PLXNA3P51805 1871 aa16.48■□□□□ 0.23
SHMT2-204ENST00000553324 PTPRJQ12913 1337 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 MTMR11A4FU01 709 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 N4BP1O75113 896 aaKnown RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 PHACTR2O75167 634 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 STAU1O95793 577 aaKnown RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 OR4Q2P0C623 313 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 PCSK1P29120 753 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 ADAM9Q13443 819 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 SLC39A12Q504Y0 691 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 COBLL1Q53SF7 1204 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 PDZD4Q76G19 769 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 BMP8AQ7Z5Y6 402 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 ATAD1Q8NBU5 361 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 OR10T2Q8NGX3 314 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 SPPL2BQ8TCT7 592 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 FGF13Q92913 245 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 CORO1BQ9BR76 489 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 C11orf16Q9NQ32 467 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 DDX43Q9NXZ2 648 aaKnown RBP16.47■□□□□ 0.23
SHMT2-204ENST00000553324 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 PCDHA5Q9Y5H7 936 aa16.47■□□□□ 0.23
SHMT2-204ENST00000553324 TMEM221A6NGB7 291 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 M0R296 226 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 GABRDO14764 452 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 ASGR2P07307 311 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 NR2F2P24468 414 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 PSMC2P35998 433 aaKnown RBP16.46■□□□□ 0.23
SHMT2-204ENST00000553324 PPP1R2P41236 205 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 NTHL1P78549 312 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
SHMT2-204ENST00000553324 MTSS1LQ765P7 747 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 ADGRF2Q8IZF7 708 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 TMEM209Q96SK2 561 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 MMS19Q96T76 1030 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 RTP3Q9BQQ7 232 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 ASAH2Q9NR71 780 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 HCFC1R1Q9NWW0 138 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 SLC27A5Q9Y2P5 690 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
SHMT2-204ENST00000553324 FAM86C2PA6NEL3 165 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-204ENST00000553324 ANHXE9PGG2 379 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 FGF19O95750 216 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 KRT13P13646 458 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 UBE2HP62256 183 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 BIRC3Q13489 604 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 STIM1Q13586 685 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 VEPH1Q14D04 833 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 MAPRE1Q15691 268 aaKnown RBP16.45■□□□□ 0.22
SHMT2-204ENST00000553324 SOWAHAQ2M3V2 549 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 WDR72Q3MJ13 1102 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 MGAT5BQ3V5L5 792 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 LIMS2Q7Z4I7 341 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 ITFG1Q8TB96 612 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 TSG101Q99816 390 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 GPR88Q9GZN0 384 aa16.45■□□□□ 0.22
SHMT2-204ENST00000553324 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms