RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 S1PR5Q9H228 398 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 ADAM7Q9H2U9 754 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 VRTNQ9H8Y1 702 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 ZDHHC7Q9NXF8 308 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 MAFFQ9ULX9 164 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
TRAFD1-209ENST00000552896 STX10O60499 249 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 HUS1O60921 280 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 PHACTR2O75167 634 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 ZMYND10O75800 440 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 ABLIM3O94929 683 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 VNN1O95497 513 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 C4BPAP04003 597 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 POU2F2P09086 479 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 HNRNPA1P09651 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 GTF2H1P32780 548 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 PIK3CAP42336 1068 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 NCOA4Q13772 614 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 RARS2Q5T160 578 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 CYP26C1Q6V0L0 522 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC149Q6ZUS6 474 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 DPH6Q7L8W6 267 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 TMEM8AQ9HCN3 771 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 PRKAG3Q9UGI9 489 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 RWDD2AQ9UIY3 292 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
TRAFD1-209ENST00000552896 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 C8AP07357 584 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 IL9P15248 144 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 ATF2P15336 505 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 MTHFRP42898 656 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 MXI1P50539 228 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 NLRP12P59046 1061 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 MYL6P60660 151 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 TNNC1P63316 161 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 PPP3CAQ08209 521 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 SOWAHAQ2M3V2 549 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 UVSSAQ2YD98 709 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 DPCR1Q3MIW9 517 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC183Q5T5S1 534 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 SV2AQ7L0J3 742 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 THEM5Q8N1Q8 247 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 OR10T2Q8NGX3 314 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 ADAMTS19Q8TE59 1207 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 TAF4BQ92750 862 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 RTP3Q9BQQ7 232 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 ZCWPW1Q9H0M4 648 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 METTL14Q9HCE5 456 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 MUC3AQ02505 3323 aa12.57□□□□□ -0.4
TRAFD1-209ENST00000552896 GABRDO14764 452 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 TACC1O75410 805 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 RFPL2O75678 378 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 GNA14O95837 355 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 CST3P01034 146 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 PTMSP20962 102 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 PCSK1P29120 753 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 GCLMP48507 274 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 LHX1P48742 406 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 ARPP19P56211 112 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 STX17P56962 302 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 MYL7Q01449 175 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 TSPY1Q01534 308 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 SMARCB1Q12824 385 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 GPR17Q13304 367 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC40Q4G0X9 1142 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 PPM1LQ5SGD2 360 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 KRT39Q6A163 491 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 TMC5Q6UXY8 1006 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 ADHFE1Q8IWW8 467 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 SLC35C1Q96A29 364 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 ZNF707Q96C28 371 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 APOL5Q9BWW9 433 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms