RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 IKZF4Q9H2S9 585 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 THAP9Q9H5L6 903 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PIDD1Q9HB75 910 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 FBXL5Q9UKA1 691 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 FBXW11Q9UKB1 542 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 CDH9Q9ULB4 789 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 CTNND2Q9UQB3 1225 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 USTQ9Y2C2 406 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 SMTNL1A8MU46 457 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ZNF197O14709 1029 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 TGM5O43548 720 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 TBC1D4O60343 1298 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ZMYND10O75800 440 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ASS1P00966 412 aaKnown RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 EEF1GP26641 437 aaKnown RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 GNL1P36915 607 aaPredicted RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 CASP4P49662 377 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 EPHB3P54753 998 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 SMAD2Q15796 467 aaKnown RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 DCAF17Q5H9S7 520 aaPredicted RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 ISM2Q6H9L7 571 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 CD300LGQ6UXG3 332 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ENOSF1Q7L5Y1 443 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ADGRD2Q7Z7M1 963 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 UNC93AQ86WB7 457 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 OR5B17Q8NGF7 314 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 GPT2Q8TD30 523 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 RABGGTAQ92696 567 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 JAKMIP2Q96AA8 810 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 MSLNLQ96KJ4 702 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 SRRTQ9BXP5 876 aaKnown RBP11□□□□□ -0.65
TRAFD1-208ENST00000552890 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11□□□□□ -0.65
TRAFD1-208ENST00000552890 SIX4Q9UIU6 781 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 DAAM1Q9Y4D1 1078 aa11□□□□□ -0.65
TRAFD1-208ENST00000552890 NCOR1O75376 2440 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 CDH23Q9H251 3354 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 GTPBP10A4D1E9 387 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 GRXCR2A6NFK2 248 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 GABRDO14764 452 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 MICAL2O94851 1124 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 CSPG5O95196 566 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 WARSP23381 471 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 SLC8A3P57103 927 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 RPL10AP62906 217 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 ROR1Q01973 937 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 CBX2Q14781 532 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 TAF12Q16514 161 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 TDRD10Q5VZ19 366 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 LLGL2Q6P1M3 1020 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 PRSS55Q6UWB4 352 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 OTOP3Q7RTS5 596 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 LIMS2Q7Z4I7 341 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 GPR149Q86SP6 731 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 PALB2Q86YC2 1186 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 AUTS2Q8WXX7 1259 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 NXPE3Q969Y0 559 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 BORCS6Q96GS4 357 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 ZNF512Q96ME7 567 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 PHF7Q9BWX1 381 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 CXCL16Q9H2A7 254 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 DDX43Q9NXZ2 648 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 KIAA1257Q9ULG3 409 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 COQ4Q9Y3A0 265 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 PCDHB5Q9Y5E4 795 aa10.99□□□□□ -0.65
TRAFD1-208ENST00000552890 ANK1P16157 1881 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CCDC195A0A1B0GUA6 201 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 SOBPA7XYQ1 873 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 F8W810 466 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 AFPP02771 609 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 C8AP07357 584 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 PTPN2P17706 415 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 BMP6P22004 513 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 LTBRP36941 435 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 MTIF2P46199 727 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 GCLMP48507 274 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 GUCY2FP51841 1108 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 MYL6P60660 151 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 NOP14P78316 857 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CFAP221Q4G0U5 840 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CYP4A22Q5TCH4 519 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 WSCD1Q658N2 575 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 FMNL3Q8IVF7 1028 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 TRIM59Q8IWR1 403 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 ZSWIM2Q8NEG5 633 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 OR6B3Q8NGW1 331 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CXorf38Q8TB03 319 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 SMG7Q92540 1137 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 SLC35C1Q96A29 364 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 GCNAQ96QF7 691 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms