RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 ZNF280DQ6N043 979 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CWC27Q6UX04 472 aaKnown RBP9.6□□□□□ -0.87
PRKCH-203ENST00000552875 ATG14Q6ZNE5 492 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 FERMT3Q86UX7 667 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TMC8Q8IU68 726 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 ABCA7Q8IZY2 2146 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 USP33Q8TEY7 942 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 CEP170P1Q96L14 293 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 LGMNQ99538 433 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TRIM4Q9C037 500 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 DIAPH3Q9NSV4 1193 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-203ENST00000552875 FBXL5Q9UKA1 691 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 YIPF1Q9Y548 306 aa9.6□□□□□ -0.87
PRKCH-203ENST00000552875 TDRD15B5MCY1 1934 aaKnown RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 OTOL1A6NHN0 477 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 PTGESO14684 152 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 U2AF2P26368 475 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 CLCNKBP51801 687 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 SEC13P55735 322 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 PSMC5P62195 406 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 MRPS21P82921 87 aaKnown RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 CCDC173Q0VFZ6 552 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 GRIK2Q13002 908 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 UPP1Q16831 310 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 CCDC157Q569K6 752 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 WDR45BQ5MNZ6 344 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 EOGTQ5NDL2 527 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 WWC2Q6AWC2 1192 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 ANO5Q75V66 913 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 BAHD1Q8TBE0 780 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 HMGB4Q8WW32 186 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 ATP2A3Q93084 1043 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 POLR3CQ9BUI4 534 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 LRRC3Q9BY71 257 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 OXCT2Q9BYC2 517 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-203ENST00000552875 UNC45AQ9H3U1 944 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 TM7SF3Q9NS93 570 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 PCDHGB2Q9Y5G2 931 aa9.59□□□□□ -0.87
PRKCH-203ENST00000552875 I3L4J1 428 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 STBD1O95210 358 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 RTP5Q14D33 572 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 C6orf132Q5T0Z8 1188 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 ARHGAP40Q5TG30 622 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 PLA2G4FQ68DD2 849 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 CASC1Q6TDU7 716 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 GAREM2Q75VX8 874 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-203ENST00000552875 CMTM8Q8IZV2 173 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 CCDC33Q8N5R6 958 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 DEFB119Q8N690 84 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 FRMD1Q8N878 549 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 ZNF248Q8NDW4 579 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 APPL2Q8NEU8 664 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 CRYGNQ8WXF5 182 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 FOXJ1Q92949 421 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 PSMG2Q969U7 264 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 ADPGKQ9BRR6 497 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 DHX33Q9H6R0 707 aaKnown RBP9.58□□□□□ -0.88
PRKCH-203ENST00000552875 ECT2Q9H8V3 914 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 NUB1Q9Y5A7 615 aa9.58□□□□□ -0.88
PRKCH-203ENST00000552875 PTPRQQ9UMZ3 2332 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 NOTCH2Q04721 2471 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TSC2P49815 1807 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TERTO14746 1132 aaKnown RBP9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TBX3O15119 743 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 ZNF217O75362 1048 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 RECQL4O94761 1208 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
PRKCH-203ENST00000552875 ARSAP15289 507 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 CIITAP33076 1130 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 MATKP42679 507 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 BRCC3P46736 316 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 PDE1AP54750 535 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 MBTD1Q05BQ5 628 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 SCRN1Q12765 414 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 VEPH1Q14D04 833 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 EMC2Q15006 297 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 NAB2Q15742 525 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TAF12Q16514 161 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 INAVAQ3KP66 663 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 DHRS13Q6UX07 377 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 OTUD6AQ7L8S5 288 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 DNAJB7Q7Z6W7 309 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TRIML1Q8N9V2 468 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 IGDCC4Q8TDY8 1250 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 PRIMPOLQ96LW4 560 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 HSPA12BQ96MM6 686 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 MTRQ99707 1265 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 NFKBIZQ9BYH8 718 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms