RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
RAB3IP-216ENST00000552199 USTQ9Y2C2 406 aa14.87□□□□□ -0.03
RAB3IP-216ENST00000552199 O00370 1275 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 MED7O43513 233 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 ACTN2P35609 894 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 RAD23BP54727 409 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 PLTPP55058 493 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CDH8P55286 799 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 TAP1Q03518 808 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 TMEM132DQ14C87 1099 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CEP85LQ5SZL2 805 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 DENND1BQ6P3S1 775 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 DNAJC24Q6P3W2 148 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 EXD1Q8NHP7 514 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 ACAP3Q96P50 834 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 LHX5Q9H2C1 402 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 PARP2Q9UGN5 583 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CPA4Q9UI42 421 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 DYNC1LI2O43237 492 aaPredicted RBP14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 ECEL1O95672 775 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CD19P15391 556 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 PPP1R15BQ5SWA1 713 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 MORN1Q5T089 497 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 FBXO25Q8TCJ0 367 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 ADPGKQ9BRR6 497 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 SMYD3Q9H7B4 428 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 TMBIM4Q9HC24 238 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
RAB3IP-216ENST00000552199 CITO14578 2027 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 A6NJR5 290 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 SHOX2O60902 331 aaPredicted RBP14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 RALAP11233 206 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 POLR2BP30876 1174 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 ZNF252P-AS1Q0IIN9 211 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 KCTD16Q68DU8 428 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 DCUN1D2Q6PH85 259 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 NT5DC4Q86YG4 428 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 CCDC50Q8IVM0 306 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 HPDLQ96IR7 371 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 ATP6V1G3Q96LB4 118 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 MCEEQ96PE7 176 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 DCLK3Q9C098 648 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 CHST7Q9NS84 486 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 ITGA11Q9UKX5 1188 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 AGAP1Q9UPQ3 857 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 C2CD2Q9Y426 696 aa14.85□□□□□ -0.03
RAB3IP-216ENST00000552199 HMGB1P1B2RPK0 211 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 CILPO75339 1184 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 P4HA1P13674 534 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 FGFR4P22455 802 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 GRM5P41594 1212 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 SKOR1P84550 965 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 MAP2K5Q13163 448 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 KLF1Q13351 362 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 IRF5Q13568 498 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 SNX1Q13596 522 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 KIZQ2M2Z5 673 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 CST9Q5W186 159 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 C3orf20Q8ND61 904 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 OR2W6PQ8NHA6 318 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 HEMGNQ9BXL5 484 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 OSBPL8Q9BZF1 889 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 FAM129AQ9BZQ8 928 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 ELOVL4Q9GZR5 314 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 HOMER3Q9NSC5 361 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 GNEQ9Y223 722 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 DOCK3Q8IZD9 2030 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 GOLGA6L10A6NI86 522 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 STAU1O95793 577 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 MYZAPP0CAP1 466 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 RBP5P82980 135 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 CDC42EP1Q00587 391 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 OGDHQ02218 1023 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 PTPN11Q06124 597 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 PPP1R7Q15435 360 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 DCAF4L1Q3SXM0 396 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 PTPN20Q4JDL3 420 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 EMC10Q5UCC4 262 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 LRRC38Q5VT99 294 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 SYDE1Q6ZW31 735 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 RCOR2Q8IZ40 523 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 ART4Q93070 314 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 TMEM176AQ96HP8 235 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 TWNKQ96RR1 684 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 DPP3Q9NY33 737 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 MTRF1LQ9UGC7 380 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms