RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 ZNF570Q96NI8 536 aa24.95■■□□□ 1.59
NPAS3-211ENST00000551634 RASSF2P50749 326 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 GPS1Q13098 491 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 CENPUQ71F23 418 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 GLIS1Q8NBF1 620 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 RBBP8NLQ8NC74 664 aaPredicted RBP24.95■■□□□ 1.58
NPAS3-211ENST00000551634 KIAA1683Q9H0B3 1180 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 APOBEC3GQ9HC16 384 aaKnown RBP24.95■■□□□ 1.58
NPAS3-211ENST00000551634 FETUBQ9UGM5 382 aa24.95■■□□□ 1.58
NPAS3-211ENST00000551634 AGO2Q9UKV8 859 aaKnown RBP24.95■■□□□ 1.58
NPAS3-211ENST00000551634 TMEM191CA6NGB0 347 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 TMEM191BP0C7N4 346 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 MFSD7Q6UXD7 560 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 VSIG10LQ86VR7 867 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 NKD2Q969F2 451 aaPredicted RBP24.94■■□□□ 1.58
NPAS3-211ENST00000551634 PHACTR1Q9C0D0 580 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 PGAP2Q9UHJ9 254 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 HGSO14964 777 aaPredicted RBP24.94■■□□□ 1.58
NPAS3-211ENST00000551634 PSAPP07602 524 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 KRT10P13645 584 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 MMP8P22894 467 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 CCND2P30279 289 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 RNASEH2BQ5TBB1 312 aaKnown RBP24.94■■□□□ 1.58
NPAS3-211ENST00000551634 BZW1Q7L1Q6 419 aaKnown RBP24.94■■□□□ 1.58
NPAS3-211ENST00000551634 VPS37BQ9H9H4 285 aa24.94■■□□□ 1.58
NPAS3-211ENST00000551634 PSMC3IPQ9P2W1 217 aaPredicted RBP24.94■■□□□ 1.58
NPAS3-211ENST00000551634 TYROBPO43914 113 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 KRT1P04264 644 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 CA4P22748 312 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 VCPP55072 806 aaKnown RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 OASLQ15646 514 aaKnown RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ZC3H12AQ5D1E8 599 aaKnown RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 KAZNQ674X7 775 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 SPOCD1Q6ZMY3 1216 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 POLR3FQ9H1D9 316 aaPredicted RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 CYP26B1Q9NR63 512 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 E7ENQ6 273 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 PI4K2BG5E9Z4 385 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ITGAVP06756 1048 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ATF7P17544 494 aaPredicted RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 CHRNA5P30532 468 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 RPA3P35244 121 aaPredicted RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 NLRP11P59045 1033 aaKnown RBP24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ATP13A4Q4VNC1 1196 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ANKRD20A2Q5SQ80 823 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ANKRD20A1Q5TYW2 823 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 ANKRD20A3Q5VUR7 823 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 MTMR14Q8NCE2 650 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 PCDH9Q9HC56 1237 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 SLCO1B3Q9NPD5 702 aa24.93■■□□□ 1.58
NPAS3-211ENST00000551634 LDHAP00338 332 aaKnown RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 CALB1P05937 261 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ZSCAN5DPP0CG00 497 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 SLFN12LQ6IEE8 588 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ZNF398Q8TD17 642 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 C10orf82Q8WW14 230 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 CTDP1Q9Y5B0 961 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 PIGRP01833 764 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 WNT7BP56706 349 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 FASTKD3Q14CZ7 662 aaKnown RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 EFHC2Q5JST6 749 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ZFYVE27Q5T4F4 411 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 HHATQ5VTY9 493 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 PCGF5Q86SE9 256 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 PDGFDQ9GZP0 370 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 DDX56Q9NY93 547 aaKnown RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 GRID1Q9ULK0 1009 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 RPL26L1Q9UNX3 145 aaKnown RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 PTPRJQ12913 1337 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 TRAFD1O14545 582 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 LIN7AO14910 233 aaPredicted RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ZWINTO95229 277 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 RPL7AP62424 266 aaKnown RBP24.92■■□□□ 1.58
NPAS3-211ENST00000551634 SWSAP1Q6NVH7 229 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ZBED8Q8IZ13 594 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 SPOCK2Q92563 424 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 KIF9Q9HAQ2 790 aa24.92■■□□□ 1.58
NPAS3-211ENST00000551634 ACOT2P49753 483 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 SLC45A4Q5BKX6 768 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 C4orf33Q8N1A6 199 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 ZNF606Q8WXB4 792 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 CGRRF1Q99675 332 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 RNPEPL1Q9HAU8 725 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 KLHL11Q9NVR0 708 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 RBAKQ9NYW8 714 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-211ENST00000551634 SEPT9Q9UHD8 586 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-211ENST00000551634 IVNS1ABPQ9Y6Y0 642 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 hCG_1818297A0A087WSY0 165 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 NR3C2P08235 984 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 KCNA2P16389 499 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 NOP14P78316 857 aaKnown RBP24.91■■□□□ 1.58
NPAS3-211ENST00000551634 SLC1A5Q15758 541 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 TFDP3Q5H9I0 405 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 TRIM6Q9C030 488 aaPredicted RBP24.91■■□□□ 1.58
NPAS3-211ENST00000551634 CYLDQ9NQC7 956 aa24.91■■□□□ 1.58
NPAS3-211ENST00000551634 HNRNPCL1O60812 293 aaKnown RBP24.9■■□□□ 1.58
NPAS3-211ENST00000551634 LUC7L3O95232 432 aaKnown RBP24.9■■□□□ 1.58
NPAS3-211ENST00000551634 TARSP26639 723 aaKnown RBP24.9■■□□□ 1.58
NPAS3-211ENST00000551634 ZNF132P52740 706 aa24.9■■□□□ 1.58
NPAS3-211ENST00000551634 TAP1Q03518 808 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms