RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 ZNF334Q9HCZ1 680 aaPredicted RBP14.07□□□□□ -0.16
NPAS3-209ENST00000551008 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 MAFFQ9ULX9 164 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 L1RE1Q9UN81 338 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
NPAS3-209ENST00000551008 DMDP11532 3685 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
NPAS3-209ENST00000551008 HCRTO43612 131 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 ATF6P18850 670 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 PAX3P23760 479 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 AFMP43652 599 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 TFAMQ00059 246 aaKnown RBP14.06□□□□□ -0.16
NPAS3-209ENST00000551008 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 TANGO2Q6ICL3 276 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 USP37Q86T82 979 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 SHKBP1Q8TBC3 707 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 PKMYT1Q99640 499 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 MKNK1Q9BUB5 465 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 OXCT2Q9BYC2 517 aaPredicted RBP14.06□□□□□ -0.16
NPAS3-209ENST00000551008 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 AGPAT3Q9NRZ7 376 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 TMLHEQ9NVH6 421 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 HSPBP1Q9NZL4 362 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 FBXL21Q9UKT6 434 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
NPAS3-209ENST00000551008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.05□□□□□ -0.16
NPAS3-209ENST00000551008 FAM237AA0A1B0GTK4 181 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 KPNA7A9QM74 516 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 MICAL2O94851 1124 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 LDHAP00338 332 aaKnown RBP14.05□□□□□ -0.16
NPAS3-209ENST00000551008 SLFN14P0C7P3 912 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 PFKFB1P16118 471 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 PTPN5P54829 565 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 FAM78AQ5JUQ0 283 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 STXBP5Q5T5C0 1151 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 MTSS1LQ765P7 747 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 LIMS2Q7Z4I7 341 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 PDCL2Q8N4E4 241 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 PLEKHO2Q8TD55 490 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 ASB16Q96NS5 453 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 LRRC27Q9C0I9 530 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 TBC1D17Q9HA65 648 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 ARHGEF3Q9NR81 526 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 INTS13Q9NVM9 706 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 GDE1Q9NZC3 331 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 CFAP45Q9UL16 551 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 AGAP1Q9UPQ3 857 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 UBE4BO95155 1302 aa14.05□□□□□ -0.16
NPAS3-209ENST00000551008 H0Y858 1186 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 CLIC2O15247 247 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 LRRN2O75325 713 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 ECI2O75521 394 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 GLULP15104 373 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 CMA1P23946 247 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 AMPD3Q01432 767 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 TEAD2Q15562 447 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 SV2CQ496J9 727 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 SLC39A12Q504Y0 691 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 GAREM2Q75VX8 874 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 PDZD4Q76G19 769 aaPredicted RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 LRRC52Q8N7C0 313 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 NOC3LQ8WTT2 800 aaKnown RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 ZNF560Q96MR9 790 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 DDX23Q9BUQ8 820 aaKnown RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 FOXQ1Q9C009 403 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 MFSD1Q9H3U5 465 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 GOLPH3LQ9H4A5 285 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 IL21Q9HBE4 155 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 SLC39A2Q9NP94 309 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 GDAP2Q9NXN4 497 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 ITGA11Q9UKX5 1188 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
NPAS3-209ENST00000551008 RIF1Q5UIP0 2472 aaKnown RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 ZFHX2Q9C0A1 2572 aaPredicted RBP14.04□□□□□ -0.16
NPAS3-209ENST00000551008 PVALEFA0A1B0GWK0 134 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 KIAA0391O15091 583 aaKnown RBP14.03□□□□□ -0.16
NPAS3-209ENST00000551008 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 MYL4P12829 197 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 MRE11P49959 708 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 NUBP1P53384 320 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 STARD6P59095 220 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 BFSP1Q12934 665 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 STK4Q13043 487 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 PHLDB3Q6NSJ2 640 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 VITQ6UXI7 678 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
NPAS3-209ENST00000551008 STKLD1Q8NE28 680 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms