RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 TGM5O43548 720 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 ASS1P00966 412 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 KCNA5P22460 613 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 LTBRP36941 435 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 MTIF2P46199 727 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 FMO5P49326 533 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 ROR1Q01973 937 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 DLX2Q07687 328 aaPredicted RBP17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 KCNH2Q12809 1159 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 LILRA6Q6PI73 481 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 TMEM184AQ6ZMB5 413 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 VRTNQ9H8Y1 702 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 RAB20Q9NX57 234 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
CHMP1A-209ENST00000550872 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 N4BP1O75113 896 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 TBX10O75333 385 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 C1RP00736 705 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 P4HA1P13674 534 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 CPB1P15086 417 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 LHX1P48742 406 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 MYL7Q01449 175 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 WDR44Q5JSH3 913 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 SPOPLQ6IQ16 392 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 ANKRD54Q6NXT1 300 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 LIMS2Q7Z4I7 341 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 OSTM1Q86WC4 334 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 KREMEN2Q8NCW0 462 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 ZNF461Q8TAF7 563 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 SPATA18Q8TC71 538 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 SEMA4DQ92854 862 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 MAN1C1Q9NR34 630 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 DDX43Q9NXZ2 648 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 CLEC1BQ9P126 229 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 DPP7Q9UHL4 492 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 COQ4Q9Y3A0 265 aa17.39■□□□□ 0.37
CHMP1A-209ENST00000550872 LRRN2O75325 713 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 TACC1O75410 805 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 OR4Q2P0C623 313 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 WARSP23381 471 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 NOP14P78316 857 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 MYL5Q02045 173 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 CETN1Q12798 172 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 ZSCAN23Q3MJ62 389 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 SCARA5Q6ZMJ2 495 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 OR10T2Q8NGX3 314 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 TMEM209Q96SK2 561 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 RTP3Q9BQQ7 232 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 FUCA2Q9BTY2 467 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 SNX25Q9H3E2 840 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 PLEKHA4Q9H4M7 779 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 DZANK1Q9NVP4 752 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 THEGQ9P2T0 379 aa17.38■□□□□ 0.37
CHMP1A-209ENST00000550872 WDR27A2RRH5 827 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 GABRDO14764 452 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 PMM2O15305 246 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 P4HA2O15460 535 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 ABLIM3O94929 683 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 HOXB8P17481 243 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 PCSK1P29120 753 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 ELF1P32519 619 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 TSPY1Q01534 308 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 GPR17Q13304 367 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 CLUL1Q15846 466 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 TPGS2Q68CL5 300 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 C12orf76Q8N812 135 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 OR6B3Q8NGW1 331 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 KBTBD7Q8WVZ9 684 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 APOL5Q9BWW9 433 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 SMYD3Q9H7B4 428 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 APOBEC3GQ9HC16 384 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 FANCLQ9NW38 375 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 AFF4Q9UHB7 1163 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 CD207Q9UJ71 328 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 FBXW11Q9UKB1 542 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 PLXNA3P51805 1871 aa17.37■□□□□ 0.37
CHMP1A-209ENST00000550872 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 ACAT1P24752 427 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 EEF1GP26641 437 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 RAP1GAPP47736 663 aa17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 ZNF165P49910 485 aa17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 CDH8P55286 799 aa17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 TFF2Q03403 129 aa17.36■□□□□ 0.37
CHMP1A-209ENST00000550872 ADCY1Q08828 1119 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms