RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 FAM171A1Q5VUB5 890 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 TAS1R1Q7RTX1 841 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 OSTM1Q86WC4 334 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 METTL23Q86XA0 190 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 RBBP8NLQ8NC74 664 aaPredicted RBP10.99□□□□□ -0.65
RAB5C-207ENST00000550504 KBTBD7Q8WVZ9 684 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 JAKMIP2Q96AA8 810 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 TMEM169Q96HH4 297 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 FAXDC2Q96IV6 333 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 TWNKQ96RR1 684 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 ACP6Q9NPH0 428 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 SPG21Q9NZD8 308 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 PCDHB12Q9Y5F1 795 aa10.99□□□□□ -0.65
RAB5C-207ENST00000550504 SF3B1O75533 1304 aaKnown RBP eCLIP10.99□□□□□ -0.658e-6■■■■■ 107
RAB5C-207ENST00000550504 GBF1Q92538 1859 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 ARHGEF37A1IGU5 675 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 A8MXQ7 604 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 CILPO75339 1184 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 TACC1O75410 805 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 FERP16591 822 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 ACAT1P24752 427 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 LMO2P25791 158 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 INCA1Q0VD86 236 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 OVOS1Q6IE37 1185 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 DPH6Q7L8W6 267 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 LIMS2Q7Z4I7 341 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 FAM71AQ8IYT1 594 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 TDHQ8IZJ6 230 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 TMEM86AQ8N2M4 240 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 LPIN3Q9BQK8 851 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 C17orf80Q9BSJ5 609 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 VN1R3Q9BXE9 311 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 ZNHIT6Q9NWK9 470 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 PUF60Q9UHX1 559 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 DSEQ9UL01 958 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 MTUS1Q9ULD2 1270 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 BARX2Q9UMQ3 279 aaPredicted RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 YBX2Q9Y2T7 364 aaKnown RBP10.98□□□□□ -0.65
RAB5C-207ENST00000550504 NME7Q9Y5B8 376 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 PCDHA11Q9Y5I1 949 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 TSC2P49815 1807 aa10.98□□□□□ -0.65
RAB5C-207ENST00000550504 FGF18O76093 207 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CSPG5O95196 566 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CYP11A1P05108 521 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CD19P15391 556 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 TYMPP19971 482 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CLCN1P35523 988 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 PPM1AP35813 382 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 BMPR1AP36894 532 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CDR1P51861 262 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 RAD23BP54727 409 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 PSMC1P62191 440 aaKnown RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 YWHAHQ04917 246 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 KLHL30Q0D2K2 578 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 ELAVL2Q12926 359 aaKnown RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 TDRD12Q587J7 1177 aaKnown RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 IRF2BP2Q7Z5L9 587 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 ACOT1Q86TX2 421 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 SLC47A2Q86VL8 602 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 TTC39CQ8N584 583 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 KLHL23Q8NBE8 558 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 SLC4A11Q8NBS3 891 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 HEXIM2Q96MH2 286 aaKnown RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 PBX4Q9BYU1 374 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 DPEP3Q9H4B8 488 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 DDX43Q9NXZ2 648 aaKnown RBP10.97□□□□□ -0.65
RAB5C-207ENST00000550504 AIPL1Q9NZN9 384 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 MSRAQ9UJ68 235 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 CNTN6Q9UQ52 1028 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
RAB5C-207ENST00000550504 NLRC5Q86WI3 1866 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 FAM170AA1A519 330 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 CARNS1A5YM72 827 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 C2CD2LO14523 706 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 GABRDO14764 452 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 SYN3O14994 580 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 THAP12O43422 761 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 ATP2C2O75185 946 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 SOD2P04179 222 aa10.96□□□□□ -0.65
RAB5C-207ENST00000550504 SERPING1P05155 500 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms