RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 GCAP28676 217 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 FMO1Q01740 532 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 RHPN2Q8IUC4 686 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 PTCD3Q96EY7 689 aaKnown RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 C11orf70Q9BRQ4 267 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 SUDS3Q9H7L9 328 aaPredicted RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 DNPEPQ9ULA0 475 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 I3L4J1 428 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 PDE5AO76074 875 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 CYP11B1P15538 503 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 SYDE1Q6ZW31 735 aaPredicted RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 LENG1Q96BZ8 264 aaPredicted RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
VDR-208ENST00000550325 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
VDR-208ENST00000550325 TTC36A6NLP5 189 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 TCEA3O75764 348 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 MFAP3P55082 362 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 RBM44Q6ZP01 1051 aaKnown RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 SDCCAG8Q86SQ7 713 aaPredicted RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 AGBL1Q96MI9 1066 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 PANX3Q96QZ0 392 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ARHGEF35A5YM69 484 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 IMPDH2P12268 514 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 GEMIN4P57678 1058 aaKnown RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 GAD2Q05329 585 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 LSAMPQ13449 338 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 RABGAP1LQ5R372 815 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ULK2Q8IYT8 1036 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 PAFAH2Q99487 392 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 MECRQ9BV79 373 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 TLE6Q9H808 572 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 TMCO1Q9UM00 188 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 MSH4O15457 936 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 GCNAQ96QF7 691 aa12.74□□□□□ -0.37
VDR-208ENST00000550325 ZNF395Q9H8N7 513 aaPredicted RBP12.74□□□□□ -0.37
VDR-208ENST00000550325 SRCAPQ6ZRS2 3230 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 MAGEB3O15480 346 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 AQP4P55087 323 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 SLC25A3Q00325 362 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 NCOA4Q13772 614 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 ETNPPLQ8TBG4 499 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 A8MXQ7 604 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 DNAJC6O75061 913 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 RARBP10826 455 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 NSFP46459 744 aaKnown RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 TAF1P21675 1872 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 KAT6AQ92794 2004 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 ATP8B3O60423 1300 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 C6orf229H3BNL8 230 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 DLG1Q12959 904 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 HIF1AQ16665 826 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 SAE1Q9UBE0 346 aaPredicted RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 APPL1Q9UKG1 709 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
VDR-208ENST00000550325 TDRKHQ9Y2W6 561 aaKnown RBP12.73□□□□□ -0.37
VDR-208ENST00000550325 LOC102724428A0A0B4J2F2 783 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 TMCC1O94876 653 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 KRT1P04264 644 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 ASLP04424 464 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 CYP1A2P05177 515 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 PHBP35232 272 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 HADHBP55084 474 aaKnown RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 SIK1P57059 783 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 TAS2R40P59535 323 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 YWHAGP61981 247 aaKnown RBP eCLIP12.72□□□□□ -0.37
VDR-208ENST00000550325 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 ACAP1Q15027 740 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 SFT2D3Q587I9 215 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 IYDQ6PHW0 289 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 TREML1Q86YW5 311 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 KREMEN1Q96MU8 473 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 PHACTR1Q9C0D0 580 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms