RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SLITRK6Q9H5Y7 841 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 KBTBD4Q9NVX7 518 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 FBXO4Q9UKT5 387 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 CFAP45Q9UL16 551 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 SLC27A5Q9Y2P5 690 aa11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 RIF1Q5UIP0 2472 aaKnown RBP11.74□□□□□ -0.53
VTI1BP3-201ENST00000550220 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 SOBPA7XYQ1 873 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 TISP43B9A030 160 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 DPYSL4O14531 572 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZNF263O14978 683 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 HUS1O60921 280 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 MOSPD3O75425 235 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 WEE1P30291 646 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 CDC25CP30307 473 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 CCR2P41597 374 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 RPS9P46781 194 aaKnown RBP11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 RBP5P82980 135 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 TSPY1Q01534 308 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 KCNA1Q09470 495 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 TEAD2Q15562 447 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 NFE2Q16621 373 aaPredicted RBP11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 SLC39A12Q504Y0 691 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 TPRG1Q6ZUI0 275 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 HS6ST3Q8IZP7 471 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 GPD1LQ8N335 351 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 ATAD1Q8NBU5 361 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZSCAN18Q8TBC5 510 aaPredicted RBP11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 CLDN23Q96B33 292 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 LRRC3Q9BY71 257 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 PLA2G2FQ9BZM2 168 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 LTB4R2Q9NPC1 389 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 OBP2AQ9NY56 170 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 FAM13BQ9NYF5 915 aa11.73□□□□□ -0.53
VTI1BP3-201ENST00000550220 MYH11P35749 1972 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 A0A1W2PRU2 124 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZNF233A6NK53 670 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 CHADO15335 359 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 EIF3DO15371 548 aaKnown RBP eCLIP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 VNN2O95498 520 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 LMNAP02545 664 aaKnown RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 FCARP24071 287 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 GDI1P31150 447 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 LHX1P48742 406 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 MYL7Q01449 175 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 PPP2R5DQ14738 602 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 E2F4Q16254 413 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 WSCD1Q658N2 575 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 DPH6Q7L8W6 267 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 CSGALNACT2Q8N6G5 542 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 TOP6BLQ8N6T0 577 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 OR10T2Q8NGX3 314 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 SAAL1Q96ER3 474 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ANKRD36BP1Q96IX9 119 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZSWIM3Q96MP5 696 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 SEPT5Q99719 369 aaPredicted RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 C7orf25Q9BPX7 421 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 TRIM9Q9C026 710 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 DNAJC25Q9H1X3 360 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ATXN3LQ9H3M9 355 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZNF334Q9HCZ1 680 aaPredicted RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 HEBP1Q9NRV9 189 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 SPATA6Q9NWH7 488 aaPredicted RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 AGAP1Q9UPQ3 857 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 PCDHB5Q9Y5E4 795 aa11.72□□□□□ -0.53
VTI1BP3-201ENST00000550220 A0A087X0B3 334 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 HEPACAM2A8MVW5 462 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 PRPF6O94906 941 aaKnown RBP11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 ITGB3P05106 788 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 TMEM191BP0C7N4 346 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 SP9P0CG40 484 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 DDX6P26196 483 aaKnown RBP eCLIP11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 POLR2BP30876 1174 aaKnown RBP11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 CASP5P51878 434 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 FCHO2Q0JRZ9 810 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 GRM2Q14416 872 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 DUOXA2Q1HG44 320 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 VITQ6UXI7 678 aa11.71□□□□□ -0.53
VTI1BP3-201ENST00000550220 ASCL5Q7RTU5 278 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms