RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 USP49Q70CQ1 688 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 TMTC1Q8IUR5 882 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 SIMC1Q8NDZ2 872 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 FNIP1Q8TF40 1166 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 ASB12Q8WXK4 309 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 SEC62Q99442 399 aaKnown RBP10.49□□□□□ -0.73
PRIM1-204ENST00000549549 DHX36Q9H2U1 1008 aaKnown RBP10.49□□□□□ -0.73
PRIM1-204ENST00000549549 WASH6PQ9NQA3 447 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 XPNPEP3Q9NQH7 507 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 XPR1Q9UBH6 696 aa10.49□□□□□ -0.73
PRIM1-204ENST00000549549 MYO1CO00159 1063 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 RASSF9O75901 435 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 HAUS5O94927 633 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 INMTO95050 263 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 PIM1P11309 404 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 IDEP14735 1019 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 EGR1P18146 543 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 RRADP55042 308 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 DLX2Q07687 328 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 NFYCQ13952 458 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 AMOTQ4VCS5 1084 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 ARHGAP15Q53QZ3 475 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 SULT6B1Q6IMI4 303 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 ADGRE4PQ86SQ3 457 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 RPL10LQ96L21 214 aaKnown RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 SPATA5L1Q9BVQ7 753 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 SGPP1Q9BX95 441 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 INO80BQ9C086 356 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 TINAGL1Q9GZM7 467 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 KIF17Q9P2E2 1029 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 NRBP1Q9UHY1 535 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 HERC5Q9UII4 1024 aaKnown RBP10.48□□□□□ -0.73
PRIM1-204ENST00000549549 AGAP1Q9UPQ3 857 aa10.48□□□□□ -0.73
PRIM1-204ENST00000549549 A0A0B4J269 797 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 PMS2P1A4D2B8 440 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 ZNF785A8K8V0 405 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 CHEK2O96017 543 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 WNT3P56703 355 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-204ENST00000549549 TIGD6Q17RP2 521 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 MPZL3Q6UWV2 235 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 ZDHHC24Q6UX98 284 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 UBE3BQ7Z3V4 1068 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 LRRTM4Q86VH4 590 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 TMEFF1Q8IYR6 380 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 MS4A7Q9GZW8 240 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-204ENST00000549549 TMEM168Q9H0V1 697 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 HEYLQ9NQ87 328 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-204ENST00000549549 IFT80Q9P2H3 777 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-204ENST00000549549 SLC13A4Q9UKG4 626 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 ITIH6Q6UXX5 1313 aa10.47□□□□□ -0.73
PRIM1-204ENST00000549549 TISP43B9A030 160 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 B9A039 149 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 SNX2O60749 519 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 ALAS1P13196 640 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 FDXRP22570 491 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 ACVR2AP27037 513 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 CST5P28325 142 aaPredicted RBP10.46□□□□□ -0.73
PRIM1-204ENST00000549549 ZNF135P52742 658 aaPredicted RBP10.46□□□□□ -0.73
PRIM1-204ENST00000549549 CLRN1P58418 232 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 SLC29A2Q14542 456 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 NPY5RQ15761 445 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 UTP14CQ5TAP6 766 aaKnown RBP10.46□□□□□ -0.73
PRIM1-204ENST00000549549 HERC6Q8IVU3 1022 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 KLHL36Q8N4N3 616 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 DNERQ8NFT8 737 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 OR14K1Q8NGZ2 314 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 SIK2Q9H0K1 926 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 SAYSD1Q9NPB0 183 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 FBXO2Q9UK22 296 aaPredicted RBP10.46□□□□□ -0.73
PRIM1-204ENST00000549549 HDAC9Q9UKV0 1011 aa10.46□□□□□ -0.73
PRIM1-204ENST00000549549 TTBK1Q5TCY1 1321 aaPredicted RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 ASNA1O43681 348 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 MBD4O95243 580 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 POLBP06746 335 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 CKBP12277 381 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 NPPBP16860 134 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 PTTG1IPP53801 180 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 GP2P55259 537 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 NPEPPSP55786 919 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 UBXN2BQ14CS0 331 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 TRIM71Q2Q1W2 868 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 PPP1R32Q7Z5V6 425 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 FTSJ3Q8IY81 847 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 PRPF18Q99633 342 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 PYM1Q9BRP8 204 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 DDX23Q9BUQ8 820 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 CPEB1Q9BZB8 566 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 GSTO2Q9H4Y5 243 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 NSUN3Q9H649 340 aaKnown RBP10.45□□□□□ -0.74
PRIM1-204ENST00000549549 IL23AQ9NPF7 189 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
PRIM1-204ENST00000549549 FBXO34Q9NWN3 711 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms