RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CILPO75339 1184 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 MASP1P48740 699 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 PICALMQ13492 652 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ENPP2Q13822 863 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 KCNJ12Q14500 433 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC41Q15345 812 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 GRIK4Q16099 956 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 SLC8B1Q6J4K2 584 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 SLC4A11Q8NBS3 891 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 NELFBQ8WX92 580 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 TBATAQ96M53 351 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 CDK5RAP1Q96SZ6 601 aaKnown RBP5.26□□□□□ -1.57
SCAF11-212ENST00000549162 HAUS4Q9H6D7 363 aa5.26□□□□□ -1.57
SCAF11-212ENST00000549162 ATXN2Q99700 1313 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 C19orf67A6NJJ6 358 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 LRRIQ3A6PVS8 624 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 AKR1B15C9JRZ8 316 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PSTPIP1O43586 416 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PPFIA2O75334 1257 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 IFI6P09912 130 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PCSK2P16519 638 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 GNALP38405 381 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 UBA7P41226 1012 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 XRCC4Q13426 336 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SLC18A3Q16572 532 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SPDYAQ5MJ70 313 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 TPGS2Q68CL5 300 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 USP17L6PQ6QN14 398 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 NLRP8Q86W28 1048 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CMTR1Q8N1G2 835 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 TBCBQ99426 244 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 MYL10Q9BUA6 226 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FRMD8Q9BZ67 464 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 DNAI2Q9GZS0 605 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 TSPAN10Q9H1Z9 355 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 NDST4Q9H3R1 872 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 VIPAS39Q9H9C1 493 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 STX8Q9UNK0 236 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 C3orf70A6NLC5 250 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 MDM4O15151 490 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PRDM1O75626 825 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CHRNB2P17787 502 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 TCF7P36402 384 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CNGA2Q16280 664 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 UBE2SQ16763 222 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SGSM1Q2NKQ1 1148 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ARMCX5Q6P1M9 558 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CCDC186Q7Z3E2 898 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FBF1Q8TES7 1133 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SLC39A13Q96H72 371 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ZKSCAN3Q9BRR0 538 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PAGR1Q9BTK6 254 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SSU72Q9NP77 194 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CNGB3Q9NQW8 809 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FBXO28Q9NVF7 368 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ARHGEF38Q9NXL2 777 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF212Q9UDV6 495 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 LRFN2Q9ULH4 789 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 REXO2Q9Y3B8 237 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PPIL1Q9Y3C6 166 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 RPS6KL1Q9Y6S9 549 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 OR6C75A6NL08 312 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FBXO21O94952 628 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FGFR1P11362 822 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CCT6AP40227 531 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 MAGEA3P43357 314 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SMTNP53814 917 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 KRT39Q6A163 491 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 MCTP1Q6DN14 999 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 CYP4V2Q6ZWL3 525 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 USP49Q70CQ1 688 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ERMP1Q7Z2K6 904 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 HAUS6Q7Z4H7 955 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SUGP1Q8IWZ8 645 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 RHOT2Q8IXI1 618 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 COLGALT2Q8IYK4 626 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 TNS4Q8IZW8 715 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 SLC22A17Q8WUG5 538 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 NXF3Q9H4D5 531 aaKnown RBP5.25□□□□□ -1.57
SCAF11-212ENST00000549162 FBXO10Q9UK96 956 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 LHX6Q9UPM6 363 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 ASB3Q9Y575 518 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 PAXBP1Q9Y5B6 917 aa5.25□□□□□ -1.57
SCAF11-212ENST00000549162 A0A1W2PRU2 124 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 POTEB3A0JP26 581 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 C17orf102A2RUQ5 167 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 MIF4GDA9UHW6 222 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CTNNA1P35221 906 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SOX5P35711 763 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 PMS1P54277 932 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SMAD3P84022 425 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ELAVL2Q12926 359 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 NFX1Q12986 1120 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 DMP1Q13316 513 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms