RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 CLCNKBP51801 687 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 STK4Q13043 487 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 NPAS3Q8IXF0 933 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 ZNF687Q8N1G0 1237 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 SECISBP2LQ93073 1101 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 NELL2Q99435 816 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 KXD1Q9BQD3 176 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 ASB7Q9H672 318 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 SDK1Q7Z5N4 2213 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 SF3B1O75533 1304 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 TGFB1I1O43294 461 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 XPOTO43592 962 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 RHOBTB3O94955 611 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 KIF4AO95239 1232 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 ELAVL2Q12926 359 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 KCNB1Q14721 858 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 ARMCX5Q6P1M9 558 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 POTEHQ6S545 545 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 TPRG1Q6ZUI0 275 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 KIF12Q96FN5 646 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 CBWD1Q9BRT8 395 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM126AQ9BYI3 521 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 UBQLN1Q9UMX0 589 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 DERAQ9Y315 318 aa17.02■□□□□ 0.32
CHMP1A-206ENST00000549139 EXTL3O43909 919 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 B3GAT3O94766 335 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 LRPAP1P30533 357 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 MTAPQ13126 283 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 PSMD5Q16401 504 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 KNOP1Q1ED39 458 aaKnown RBP17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 CD300LGQ6UXG3 332 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 NELFCDQ8IXH7 590 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 KIAA0895Q8NCT3 520 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 FAM212AQ96EL1 285 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 PLA2G2FQ9BZM2 168 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 PCIF1Q9H4Z3 704 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 HCFC1R1Q9NWW0 138 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
CHMP1A-206ENST00000549139 ZFYVE26Q68DK2 2539 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 PODXLO00592 558 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 TRAPPC3O43617 180 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 XYLBO75191 536 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
CHMP1A-206ENST00000549139 ECI2O75521 394 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 IL18RAPO95256 599 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 SCN1AP35498 2009 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 SPAG1Q07617 926 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 ST3GAL2Q16842 350 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 UVSSAQ2YD98 709 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 FAM171A1Q5VUB5 890 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 SPATA1Q5VX52 437 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 MAMSTRQ6ZN01 415 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 ZSWIM2Q8NEG5 633 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 SLC7A14Q8TBB6 771 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 HASPINQ8TF76 798 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 SAAL1Q96ER3 474 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 FAM213AQ9BRX8 229 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
CHMP1A-206ENST00000549139 POLIQ9UNA4 740 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 C2CD2Q9Y426 696 aa17■□□□□ 0.31
CHMP1A-206ENST00000549139 NCAM2O15394 837 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 KIF20AO95235 890 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 IGFBP6P24592 240 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 ADCY1Q08828 1119 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 RAB33AQ14088 237 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 PABPC1LQ4VXU2 614 aaKnown RBP16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 JADE1Q6IE81 842 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 ZNF852Q6ZMS4 543 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 HS2ST1Q7LGA3 356 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 BRSK2Q8IWQ3 736 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 C12orf56Q8IXR9 622 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 BEST2Q8NFU1 509 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 HEBP1Q9NRV9 189 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 AGPAT3Q9NRZ7 376 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 HSPBP1Q9NZL4 362 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 TUBGCP4Q9UGJ1 667 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 RALGAPA1Q6GYQ0 2036 aa16.99■□□□□ 0.31
CHMP1A-206ENST00000549139 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 SLC30A4O14863 429 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 CLIC2O15247 247 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 UBE2HP62256 183 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 PNOCQ13519 176 aa16.98■□□□□ 0.31
CHMP1A-206ENST00000549139 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms