RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TRIM11Q96F44 468 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 FAM111AQ96PZ2 611 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 TTC1Q99614 292 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ACAD9Q9H845 621 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 RPF1Q9H9Y2 349 aaKnown RBP14.93□□□□□ -0.02
CACNB3-209ENST00000548860 PHTF1Q9UMS5 762 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 SCINQ9Y6U3 715 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 PRPSAP2O60256 369 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ZBED1O96006 694 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 GZMAP12544 262 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 TNFRSF8P28908 595 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 RASSF2P50749 326 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 SESN2P58004 480 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-209ENST00000548860 DUOXA2Q1HG44 320 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 XKR3Q5GH77 459 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 KDELC2Q7Z4H8 507 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 CD302Q8IX05 232 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ASAP3Q8TDY4 903 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 HERPUD2Q9BSE4 406 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 XPO7Q9UIA9 1087 aaKnown RBP14.93□□□□□ -0.02
CACNB3-209ENST00000548860 MAPK13O15264 365 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 KCNN4O15554 427 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ESRRAP11474 423 aaPredicted RBP14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ADORA2BP29275 332 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ELF1P32519 619 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 PDE1BQ01064 536 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 NPNTQ6UXI9 565 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 RASGEF1CQ8N431 466 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 CISHQ9NSE2 258 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 ARMCX1Q9P291 453 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 IP6K2Q9UHH9 426 aa14.93□□□□□ -0.02
CACNB3-209ENST00000548860 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 AVILO75366 819 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 PROSCO94903 275 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RXRBP28702 533 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 GPC3P51654 580 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 EPHB1P54762 984 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 GAD2Q05329 585 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 CFAP157Q5JU67 520 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 BBOF1Q8ND07 529 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 SPDL1Q96EA4 605 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 GGA3Q9NZ52 723 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 AGAP1Q9UPQ3 857 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 H0YGN5 161 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 LPXNO60711 386 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 PRKCBP05771 671 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RPA3P35244 121 aaPredicted RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 HELQQ8TDG4 1101 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 COPS5Q92905 334 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RNF34Q969K3 372 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RBM41Q96IZ5 413 aaKnown RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 NR2E3Q9Y5X4 410 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 NFS1Q9Y697 457 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 GYG2O15488 501 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 EXTL3O43909 919 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 ATP6V1G2O95670 118 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RFX1P22670 979 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 ADRA1DP25100 572 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 PHKA2P46019 1235 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 ARL4CP56559 192 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 NBPF20Q3BBV1 942 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RPAINQ86UA6 219 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 RMDN2Q96LZ7 410 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 TEX13BQ9BXU2 312 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 DHX35Q9H5Z1 703 aaKnown RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 NOP53Q9NZM5 478 aaKnown RBP14.92□□□□□ -0.02
CACNB3-209ENST00000548860 KCND2Q9NZV8 630 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 TMEM59LQ9UK28 342 aa14.92□□□□□ -0.02
CACNB3-209ENST00000548860 VWA5AO00534 786 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 CXCL8P10145 99 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 PDGFRAP16234 1089 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 TCF7P36402 384 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 PTGIRP43119 386 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ELF3P78545 371 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 MMRN1Q13201 1228 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 MROH9Q5TGP6 573 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 MTDHQ86UE4 582 aaKnown RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 CPB2Q96IY4 423 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 SPATA33Q96N06 139 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 GPR88Q9GZN0 384 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 PIM2Q9P1W9 311 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 FSBPO95073 299 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 CPP00450 1065 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ITGB3P05106 788 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 HOXA7P31268 230 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 FNTAP49354 379 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 COPS2P61201 443 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 FSTL1Q12841 308 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 C6orf163Q5TEZ5 329 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms