RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 DERAQ9Y315 318 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 TCRBV7S2A1N4TA0A589 114 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 TLR3O15455 904 aaKnown RBP22.22■■□□□ 1.15
RITA1-201ENST00000548278 CA12O43570 354 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 PHF2O75151 1096 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 P4HA1P13674 534 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 AKR1A1P14550 325 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 CD19P15391 556 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 SNX17Q15036 470 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 SIX1Q15475 284 aaPredicted RBP22.22■■□□□ 1.15
RITA1-201ENST00000548278 TSEN2Q8NCE0 465 aaKnown RBP22.22■■□□□ 1.15
RITA1-201ENST00000548278 TMEM40Q8WWA1 233 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 DDX27Q96GQ7 796 aaKnown RBP22.22■■□□□ 1.15
RITA1-201ENST00000548278 SNX27Q96L92 541 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 LHX5Q9H2C1 402 aa22.22■■□□□ 1.15
RITA1-201ENST00000548278 C17orf102A2RUQ5 167 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 MED7O43513 233 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 DDX42Q86XP3 938 aaKnown RBP eCLIP22.21■■□□□ 1.15
RITA1-201ENST00000548278 ZMAT2Q96NC0 199 aaKnown RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 MED4Q9NPJ6 270 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 CEP83Q9Y592 693 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 TMEM191CA6NGB0 347 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 AGPSO00116 658 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 DUSP11O75319 330 aaKnown RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 CHRNA3P32297 505 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 MAN1A1P33908 653 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 RPL7AP62424 266 aaKnown RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 DR1Q01658 176 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 ORC1Q13415 861 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 DHX34Q14147 1143 aaKnown RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 CYP1B1Q16678 543 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 KCTD19Q17RG1 926 aaPredicted RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 DAB2IPQ5VWQ8 1189 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 ERICH1Q86X53 443 aa22.21■■□□□ 1.15
RITA1-201ENST00000548278 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.21■■□□□ 1.15
RITA1-201ENST00000548278 MYADML2A6NDP7 307 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 SYF2O95926 243 aaKnown RBP22.2■■□□□ 1.14
RITA1-201ENST00000548278 AXLP30530 894 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 PTPN11Q06124 597 aaPredicted RBP22.2■■□□□ 1.14
RITA1-201ENST00000548278 ZBTB6Q15916 424 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 MREGQ8N565 214 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 C18orf8Q96DM3 657 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 TMEM176AQ96HP8 235 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 PLVAPQ9BX97 442 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 UTP11Q9Y3A2 253 aaKnown RBP22.2■■□□□ 1.14
RITA1-201ENST00000548278 HES2Q9Y543 173 aa22.2■■□□□ 1.14
RITA1-201ENST00000548278 FSCN2O14926 492 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 DAPK3O43293 454 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 PSTPIP1O43586 416 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 RARAP10276 462 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 TAS2R40P59535 323 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 INCA1Q0VD86 236 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 HSP90B2PQ58FF3 399 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 PPP1R15BQ5SWA1 713 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 DNAJC24Q6P3W2 148 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 ALKAL1Q6UXT8 129 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 FAM71BQ8TC56 605 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 MAGOHBQ96A72 148 aaKnown RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 TRIM51Q9BSJ1 452 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 ARHGAP39Q9C0H5 1083 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 ZMYND15Q9H091 742 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 FAM124BQ9H5Z6 455 aaPredicted RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 PCYOX1Q9UHG3 505 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 IP6K2Q9UHH9 426 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 CYTH4Q9UIA0 394 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 MTUS1Q9ULD2 1270 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 ABT1Q9ULW3 272 aaKnown RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.19■■□□□ 1.14
RITA1-201ENST00000548278 SCN1AP35498 2009 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 FAM187AA6NFU0 413 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 GGCXP38435 758 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 PTGIRP43119 386 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 YARSP54577 528 aaKnown RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 HLTFQ14527 1009 aaKnown RBP eCLIP22.19■■□□□ 1.14
RITA1-201ENST00000548278 TERF2Q15554 542 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 C7orf31Q8N865 590 aa22.19■■□□□ 1.14
RITA1-201ENST00000548278 NXF3Q9H4D5 531 aaKnown RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 BARX2Q9UMQ3 279 aaPredicted RBP22.19■■□□□ 1.14
RITA1-201ENST00000548278 GOLGA6BA6NDN3 693 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 O00370 1275 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 GNAT1P11488 350 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 CRYBB1P53674 252 aaPredicted RBP22.18■■□□□ 1.14
RITA1-201ENST00000548278 PTPN20Q4JDL3 420 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 TTC27Q6P3X3 843 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 RHOT1Q8IXI2 618 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 NME8Q8N427 588 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 RAB17Q9H0T7 212 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 NEUROG2Q9H2A3 272 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 PRDM10Q9NQV6 1147 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 C6orf222P0C671 652 aaPredicted RBP22.18■■□□□ 1.14
RITA1-201ENST00000548278 CYBAP13498 195 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 FCGRTP55899 365 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 ZNF252P-AS1Q0IIN9 211 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 CYP4A22Q5TCH4 519 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 DUPD1Q68J44 220 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 JAMLQ86YT9 394 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 C3orf20Q8ND61 904 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 MCEEQ96PE7 176 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 ERP44Q9BS26 406 aa22.18■■□□□ 1.14
RITA1-201ENST00000548278 FAM114A2Q9NRY5 505 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms