RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 SOWAHAQ2M3V2 549 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 CDKAL1Q5VV42 579 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 ELMSAN1Q6PJG2 1045 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 CREBRFQ8IUR6 639 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 SLC22A17Q8WUG5 538 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 CASP10Q92851 521 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 MMS19Q96T76 1030 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 FBXL5Q9UKA1 691 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 HCFC2Q9Y5Z7 792 aa12.2□□□□□ -0.46
CALCOCO1-208ENST00000547988 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 GABRDO14764 452 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 ADAM12O43184 909 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 TACC1O75410 805 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 WARSP23381 471 aaKnown RBP12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 OR1D2P34982 312 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 ROR1Q01973 937 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 WDR44Q5JSH3 913 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 AOPEPQ8N6M6 819 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 HDAC7Q8WUI4 952 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 SEMA4DQ92854 862 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 DZANK1Q9NVP4 752 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 FANCLQ9NW38 375 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 COG5Q9UP83 839 aa12.19□□□□□ -0.46
CALCOCO1-208ENST00000547988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 WDR27A2RRH5 827 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 GTPBP10A4D1E9 387 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 LINC01565O15544 149 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 TGM5O43548 720 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 TBX10O75333 385 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 ABLIM3O94929 683 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 TPM2P07951 284 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 CPB1P15086 417 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 EPCAMP16422 314 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 PCSK1P29120 753 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 NCAPHQ15003 741 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 SPOPLQ6IQ16 392 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 LLGL2Q6P1M3 1020 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 LILRA6Q6PI73 481 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 RTL10Q7L3V2 364 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 PALB2Q86YC2 1186 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 ANKRD20A12PQ8NF67 263 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 VN1R2Q8NFZ6 395 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 HLA-CQ95604 372 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 RTP3Q9BQQ7 232 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 ACBD6Q9BR61 282 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 TUBGCP2Q9BSJ2 902 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 BCO2Q9BYV7 579 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 ZCWPW1Q9H0M4 648 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 PLEKHA4Q9H4M7 779 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 UBE2ZQ9H832 354 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 APOBEC3GQ9HC16 384 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 FBXW11Q9UKB1 542 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 MAFFQ9ULX9 164 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 POLIQ9UNA4 740 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 MYO16Q9Y6X6 1858 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 NOTCH4Q99466 2003 aa12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
CALCOCO1-208ENST00000547988 BECN2A8MW95 431 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 ATF2P15336 505 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 ZNF18P17022 549 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 HOXB8P17481 243 aaPredicted RBP12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 LTBRP36941 435 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 ASPAP45381 313 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 TSPY1Q01534 308 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 SMARCB1Q12824 385 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 GPR17Q13304 367 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 MIIPQ5JXC2 388 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 ANKRD54Q6NXT1 300 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 SCARA5Q6ZMJ2 495 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 OSTM1Q86WC4 334 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 DCP1BQ8IZD4 617 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 OR10T2Q8NGX3 314 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 C2orf15Q8WU43 125 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 HSD3B7Q9H2F3 369 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 SNX25Q9H3E2 840 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 NDST4Q9H3R1 872 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms