RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 FOXD3Q9UJU5 478 aaPredicted RBP5.43□□□□□ -1.54
AC078880.2-201ENST00000547948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.43□□□□□ -1.54
AC078880.2-201ENST00000547948 LCTP09848 1927 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 POLR2AP24928 1970 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 TMEM150BA6NC51 233 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 K7ERI5 159 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CLIC2O15247 247 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 TEX33O43247 280 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 TGFB1I1O43294 461 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ADCY3O60266 1144 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 MSCO60682 206 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CPNE3O75131 537 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 AKAP3O75969 853 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 STBD1O95210 358 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SNAI1O95863 264 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 F2P00734 622 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GYPCP04921 128 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 RPLP1P05386 114 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PRKCBP05771 671 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CCDC175P0C221 793 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ZNF286BP0CG31 522 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 RARBP10826 455 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GLRA2P23416 452 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 YY1P25490 414 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ANXA13P27216 316 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CASP14P31944 242 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GTF2H1P32780 548 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 KRT9P35527 623 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ARL2P36404 184 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 MXI1P50539 228 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 VAMP7P51809 220 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 AP3M2P53677 418 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CCZ1BP86790 482 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CCZ1P86791 482 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SP3Q02447 781 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GSTM4Q03013 218 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 POU5F1BQ06416 359 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 RBL2Q08999 1139 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CAPSQ13938 189 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 MAP7Q14244 749 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PCBP1Q15365 356 aaKnown RBP eCLIP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SURF1Q15526 300 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SNRNP35Q16560 246 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 EXOC3L4Q17RC7 722 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 MIIPQ5JXC2 388 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CDCA2Q69YH5 1023 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ZNF574Q6ZN55 896 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ZNF765Q7L2R6 523 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 ZNF410Q86VK4 478 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 VPS36Q86VN1 386 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CCDC170Q8IYT3 715 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GPD1LQ8N335 351 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 METTL13Q8N6R0 699 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 TMEM102Q8N9M5 508 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 OR8K1Q8NGG5 319 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CACTINQ8WUQ7 758 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 BCL7CQ8WUZ0 217 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 UBXN4Q92575 508 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 USP6NLQ92738 828 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 EZH1Q92800 747 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 COPS5Q92905 334 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GATA6Q92908 595 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PMEPA1Q969W9 287 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 NXPE3Q969Y0 559 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 TMEM143Q96AN5 459 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CRELD1Q96HD1 420 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 FRMD6Q96NE9 622 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SPAG5Q96R06 1193 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 FNBP1Q96RU3 617 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PCYT2Q99447 389 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SLC38A3Q99624 504 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 OSMRQ99650 979 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 LSM14BQ9BX40 385 aaKnown RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 XPNPEP1Q9NQW7 623 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PDLIM7Q9NR12 457 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 PDGFCQ9NRA1 345 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SAGE1Q9NXZ1 904 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 GCNT4Q9P109 453 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 SUCLA2Q9P2R7 463 aaPredicted RBP5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 MYO6Q9UM54 1294 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 AKT3Q9Y243 479 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 NRCAMQ92823 1304 aa5.42□□□□□ -1.54
AC078880.2-201ENST00000547948 THSD7BQ9C0I4 1608 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 IGKV6-21A0A0C4DH24 114 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 ZNF233A6NK53 670 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 M0QZ92 97 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 CLDN3O15551 220 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 SEPT4O43236 478 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 DYNC1LI2O43237 492 aaPredicted RBP5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 EXTL3O43909 919 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 DUSP11O75319 330 aaKnown RBP5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 TNFRSF21O75509 655 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 TOM1L1O75674 476 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 ERLIN2O94905 339 aa5.41□□□□□ -1.54
AC078880.2-201ENST00000547948 C22orf31O95567 290 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms