RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	FAM189A1	O60320	539 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	PLCG1	P19174	1290 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	GABRR2	P28476	465 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CDC25C	P30307	473 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	DDIT3	P35638	169 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	PLCB2	Q00722	1185 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	POSTN	Q15063	836 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	MGAT5B	Q3V5L5	792 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	GPR158	Q5T848	1215 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	RALGPS2	Q86X27	583 aa	Predicted RBP	24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	SPEM1	Q8N4L4	309 aa		24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	LARP4B	Q92615	738 aa	Known RBP	24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	SEPT5	Q99719	369 aa	Predicted RBP	24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CDV3	Q9UKY7	258 aa	Known RBP	24.97	■■□□□ 1.59
SMARCD1-204	ENST00000547637	VNN2	O95498	520 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CYP11A1	P05108	521 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CHRNB1	P11230	501 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	ACOT2	P49753	483 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	TAF6	P49848	677 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	KARS	Q15046	597 aa	Known RBP	24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	SLC39A12	Q504Y0	691 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CRISPLD1	Q9H336	500 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	BLOC1S4	Q9NUP1	217 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	CCDC39	Q9UFE4	941 aa		24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	AGO2	Q9UKV8	859 aa	Known RBP	24.96	■■□□□ 1.59
SMARCD1-204	ENST00000547637	GPR179	Q6PRD1	2367 aa		24.95	■■□□□ 1.59
SMARCD1-204	ENST00000547637	NRG2	O14511	850 aa	Predicted RBP	24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CYB561D2	O14569	222 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	NMT1	P30419	496 aa	Known RBP	24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CNR2	P34972	360 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	LAIR1	Q6GTX8	287 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	DCP1B	Q8IZD4	617 aa	Known RBP	24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TASP1	Q9H6P5	420 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	DPP3	Q9NY33	737 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	EXOC7	Q9UPT5	735 aa		24.95	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ANO9	A1A5B4	782 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SLC38A8	A6NNN8	435 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ARNTL	O00327	626 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PPEF2	O14830	753 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	NFIC	P08651	508 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	WEE1	P30291	646 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PRR23B	Q6ZRT6	265 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	GAREM2	Q75VX8	874 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	NT5DC4	Q86YG4	428 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TMEM130	Q8N3G9	435 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SPPL2B	Q8TCT7	592 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	BPIFB1	Q8TDL5	484 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	POMGNT1	Q8WZA1	660 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	HVCN1	Q96D96	273 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PYM1	Q9BRP8	204 aa	Known RBP	24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CCSER1	Q9C0I3	900 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ZCWPW1	Q9H0M4	648 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ST6GALNAC4	Q9H4F1	302 aa		24.94	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CEP250	Q9BV73	2442 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	MED19	A0JLT2	244 aa	Predicted RBP	24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SPECC1L-ADORA2A	F8WAN1	911 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	IL18RAP	O95256	599 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SF3A1	Q15459	793 aa	Known RBP	24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SV2C	Q496J9	727 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SYNPO	Q8N3V7	929 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ZNF560	Q96MR9	790 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TMEM209	Q96SK2	561 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	STYXL1	Q9Y6J8	313 aa		24.93	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CACNA1A	O00555	2505 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	MYBPHL	A2RUH7	354 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TULP1	O00294	542 aa	Predicted RBP	24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TXLNA	P40222	546 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PNPLA4	P41247	253 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SIM2	Q14190	667 aa	Predicted RBP	24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	STXBP5	Q5T5C0	1151 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SLC39A4	Q6P5W5	647 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	GPIHBP1	Q8IV16	184 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	RTKN	Q9BST9	563 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SEL1L	Q9UBV2	794 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	DCHS1	Q96JQ0	3298 aa		24.92	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ANKRD63	C9JTQ0	380 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	LRP3	O75074	770 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SOAT2	O75908	522 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	RET	P07949	1114 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TDGF1	P13385	188 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CTH	P32929	405 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	AMPD2	Q01433	879 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	SATB1	Q01826	763 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	ZNF720	Q7Z2F6	126 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	OR10T2	Q8NGX3	314 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	CACTIN	Q8WUQ7	758 aa	Known RBP	24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	RSPRY1	Q96DX4	576 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	STK17A	Q9UEE5	414 aa		24.91	■■□□□ 1.58
SMARCD1-204	ENST00000547637	KPNA7	A9QM74	516 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PAPSS2	O95340	614 aa	Predicted RBP	24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	LDHA	P00338	332 aa	Known RBP	24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	PDC	P20941	246 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	AVPR1A	P37288	418 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TSPY1	Q01534	308 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	DYM	Q7RTS9	669 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	LONP2	Q86WA8	852 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	TTC9B	Q8N6N2	239 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	EXOC4	Q96A65	974 aa		24.9	■■□□□ 1.58
SMARCD1-204	ENST00000547637	FIZ1	Q96SL8	496 aa		24.9	■■□□□ 1.58

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms