RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 FZD8Q9H461 694 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 KLHL11Q9NVR0 708 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 B4GALT4O60513 344 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 DRD4P21917 467 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 TFDP1Q14186 410 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 Q3C1V9 767 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 LRRC38Q5VT99 294 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 SCARA5Q6ZMJ2 495 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 TAOK1Q7L7X3 1001 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 FBXO16Q8IX29 292 aaPredicted RBP16.44■□□□□ 0.22
BRF1-212ENST00000547562 WDTC1Q8N5D0 677 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 TRAPPC12Q8WVT3 735 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 TFAP2BQ92481 460 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 SEC16BQ96JE7 1060 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 NLRP4Q96MN2 994 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 SERPINB12Q96P63 405 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 RBPJLQ9UBG7 517 aa16.44■□□□□ 0.22
BRF1-212ENST00000547562 PI4K2BG5E9Z4 385 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 INO80B-WBP1J3KQ70 363 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 TNNC2P02585 160 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 GJB1P08034 283 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 KLRC2P26717 231 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 SLC26A2P50443 739 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 TAP1Q03518 808 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 KCTD2Q14681 263 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 TTC31Q49AM3 519 aaPredicted RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 PPP1R15BQ5SWA1 713 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 DCUN1D2Q6PH85 259 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 CPLX4Q7Z7G2 160 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 PACS2Q86VP3 889 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 ZNF317Q96PQ6 595 aaPredicted RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 INO80BQ9C086 356 aaPredicted RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 IVNS1ABPQ9Y6Y0 642 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 F8VP50 259 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 B4GALT5O43286 388 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 KRT1P04264 644 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 OSTNP61366 133 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 OGDHQ02218 1023 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 LMNB2Q03252 620 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 KYNUQ16719 465 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 ZFYVE27Q5T4F4 411 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 GKAP1Q5VSY0 366 aaPredicted RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 SMYD5Q6GMV2 418 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 CEP120Q8N960 986 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 ANKRD36BP1Q96IX9 119 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 ZNF668Q96K58 619 aaPredicted RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 MMP19Q99542 508 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 INTS9Q9NV88 658 aaKnown RBP16.43■□□□□ 0.22
BRF1-212ENST00000547562 CEP83Q9Y592 693 aa16.43■□□□□ 0.22
BRF1-212ENST00000547562 SPDYE5A6NIY4 337 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 LIASO43766 372 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 TJP3O95049 919 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 KRT10P13645 584 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 PIGHQ14442 188 aaPredicted RBP16.42■□□□□ 0.22
BRF1-212ENST00000547562 CCDC38Q502W7 563 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 IZUMO3Q5VZ72 239 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 EEF1DP3Q658K8 133 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 KAZNQ674X7 775 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 GSTA5Q7RTV2 222 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 EXOC3L1Q86VI1 746 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 ERICH1Q86X53 443 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 CACNA2D3Q8IZS8 1091 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 IPO4Q8TEX9 1081 aaKnown RBP16.42■□□□□ 0.22
BRF1-212ENST00000547562 COPS5Q92905 334 aa16.42■□□□□ 0.22
BRF1-212ENST00000547562 HBP1O60381 514 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 COPS2P61201 443 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 YWHAEP62258 255 aaKnown RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 TMEM132AQ24JP5 1023 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 RNF187Q5TA31 235 aaPredicted RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 CDR2LQ86X02 465 aaPredicted RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 CABS1Q96KC9 395 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 PWWP2AQ96N64 755 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 NINJ2Q9NZG7 142 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 KCNH4Q9UQ05 1017 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 FSBPO95073 299 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 CLCN3P51790 818 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 MBTD1Q05BQ5 628 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 CYP4A22Q5TCH4 519 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 HIBCHQ6NVY1 386 aaPredicted RBP16.41■□□□□ 0.22
BRF1-212ENST00000547562 SPOCD1Q6ZMY3 1216 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 ZBTB10Q96DT7 871 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 CDT1Q9H211 546 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 DNPEPQ9ULA0 475 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms