RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SCARA5Q6ZMJ2 495 aa24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 THEM5Q8N1Q8 247 aa24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 TATDN2Q93075 761 aa24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 NT5C1BQ96P26 610 aa24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 OXCT2Q9BYC2 517 aaPredicted RBP24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 INTS2Q9H0H0 1204 aaKnown RBP24.82■■□□□ 1.56
SMARCD1-203ENST00000547247 CNPP09543 421 aaKnown RBP24.81■■□□□ 1.56
SMARCD1-203ENST00000547247 LHX1P48742 406 aa24.81■■□□□ 1.56
SMARCD1-203ENST00000547247 LRMPQ12912 555 aa24.81■■□□□ 1.56
SMARCD1-203ENST00000547247 FKBP15Q5T1M5 1219 aa24.81■■□□□ 1.56
SMARCD1-203ENST00000547247 LGALS16A8MUM7 142 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 TEX28O15482 410 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 RPL17P18621 184 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 ASPAP45381 313 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 ADGRD2Q7Z7M1 963 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 KBTBD7Q8WVZ9 684 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 KLHL5Q96PQ7 755 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 CLSTN3Q9BQT9 956 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 BCO2Q9BYV7 579 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 SMYD3Q9H7B4 428 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 TLE6Q9H808 572 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 PRRC2BQ5JSZ5 2229 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 ATG2AQ2TAZ0 1938 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 GABRDO14764 452 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 TBC1D4O60343 1298 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 SERPINC1P01008 464 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 SLC9A1P19634 815 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 WARSP23381 471 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 NDUFV1P49821 464 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 CDH8P55286 799 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 FILIP1LQ4L180 1135 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 RBM23Q86U06 439 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 MRPL45Q9BRJ2 306 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 CYP3A43Q9HB55 503 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 DDX43Q9NXZ2 648 aaKnown RBP24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 FBXL5Q9UKA1 691 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 CDY1Q9Y6F8 540 aa24.8■■□□□ 1.56
SMARCD1-203ENST00000547247 REV3LO60673 3130 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 TSC2P49815 1807 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 OR6C75A6NL08 312 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 ADH1AP07327 375 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 WEE2P0C1S8 567 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 KLRC2P26717 231 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 PON1P27169 355 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 RAP1GAPP47736 663 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 UBXN1Q04323 297 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 SLC8B1Q6J4K2 584 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 TRIM65Q6PJ69 517 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 OSTM1Q86WC4 334 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 GLYCTKQ8IVS8 523 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 SDCBP2Q9H190 292 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 SNX25Q9H3E2 840 aa24.79■■□□□ 1.56
SMARCD1-203ENST00000547247 PER2O15055 1255 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 TBXAS1P24557 533 aaPredicted RBP24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 OR1D2P34982 312 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 FANCCQ00597 558 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 TCEAL5Q5H9L2 206 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 RSPO2Q6UXX9 243 aaPredicted RBP24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 PPM1KQ8N3J5 372 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 OR6B3Q8NGW1 331 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 MAFAQ8NHW3 353 aaPredicted RBP24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 RTP3Q9BQQ7 232 aa24.78■■□□□ 1.56
SMARCD1-203ENST00000547247 PCSK1P29120 753 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 GNL1P36915 607 aaPredicted RBP24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 NRIP1P48552 1158 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 KCNMA1Q12791 1236 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 CUL2Q13617 745 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 GAS2L3Q86XJ1 694 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 MICALL1Q8N3F8 863 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 CDCA3Q99618 268 aaPredicted RBP24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 ACBD6Q9BR61 282 aa24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 RTN4Q9NQC3 1192 aaKnown RBP24.77■■□□□ 1.56
SMARCD1-203ENST00000547247 ADAM12O43184 909 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 ARPP19P56211 112 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 RAB33AQ14088 237 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 DUSP6Q16828 381 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 PHLDB3Q6NSJ2 640 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 PPFIBP1Q86W92 1011 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 OR10T2Q8NGX3 314 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 FAM124BQ9H5Z6 455 aaPredicted RBP24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 APEX2Q9UBZ4 518 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 A0A1B0GTH6 734 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 A8MXQ7 604 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 CLASP2O75122 1294 aaKnown RBP24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 CPB1P15086 417 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 LMO2P25791 158 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 TSPY1Q01534 308 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 ROR1Q01973 937 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 GCNT1Q02742 428 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 ARHGEF19Q8IW93 802 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 TTC39CQ8N584 583 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 NAP1L5Q96NT1 182 aaPredicted RBP24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 ARID3AQ99856 593 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 RBSNQ9H1K0 784 aa24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 BARX2Q9UMQ3 279 aaPredicted RBP24.76■■□□□ 1.55
SMARCD1-203ENST00000547247 PRUNE2Q8WUY3 3088 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 FSD2A1L4K1 749 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 PDGFRBP09619 1106 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 CD58P19256 250 aa24.75■■□□□ 1.55
SMARCD1-203ENST00000547247 UBASH3AP57075 661 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms