RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 CLNKQ7Z7G1 428 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 USP37Q86T82 979 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 ANKMY2Q8IV38 441 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
CACNB3-204ENST00000547230 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
CACNB3-204ENST00000547230 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
CACNB3-204ENST00000547230 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 HNRNPDLO14979 420 aaKnown RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ATP9AO75110 1047 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 PIAS1O75925 651 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 BPIFB4P59827 614 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 GAD2Q05329 585 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 EFHC2Q5JST6 749 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ANO5Q75V66 913 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 RFWD2Q8NHY2 731 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 CLEC4DQ8WXI8 215 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ZNF622Q969S3 477 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 C12orf65Q9H3J6 166 aaKnown RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 SLC24A2Q9UI40 661 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 LNPEPQ9UIQ6 1025 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 CLUHO75153 1309 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 WDR91A4D1P6 747 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 GOLGA8SH3BPF8 625 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 GOLGA8MH3BSY2 632 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 PLA2G6O60733 806 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 MARK3P27448 753 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 OVGP1Q12889 678 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 WDR72Q3MJ13 1102 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 DRICH1Q6PGQ1 229 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 PHF13Q86YI8 300 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-204ENST00000547230 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 USP21Q9UK80 565 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
CACNB3-204ENST00000547230 PTPRJQ12913 1337 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 KIF3CO14782 793 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 MAP3K13O43283 966 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ICAM1P05362 532 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ACADSP16219 412 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 EIF2AK2P19525 551 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 GLRA2P23416 452 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 GNA15P30679 374 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 PIK3CAP42336 1068 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 OASLQ15646 514 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 WDR44Q5JSH3 913 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 FYB2Q5VWT5 728 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 TXNRD3NBQ6F5E7 133 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 TMEM270Q6UE05 265 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 CENPUQ71F23 418 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 TAS1R3Q7RTX0 852 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 LMNTD2Q8IXW0 634 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ZNF276Q8N554 614 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 FEZF2Q8TBJ5 459 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 DNAJC9Q8WXX5 260 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 CADM1Q9BY67 442 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 APOBEC3GQ9HC16 384 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SAR1AQ9NR31 198 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 RPL26L1Q9UNX3 145 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SHOC2Q9UQ13 582 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 CLRN2A0PK11 232 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ZWINTO95229 277 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 VNN1O95497 513 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 CAP2P40123 477 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 CETN2P41208 172 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 PTGER2P43116 358 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 RASA2Q15283 850 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ZACNQ401N2 412 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 KHDC1Q4VXA5 237 aaKnown RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
CACNB3-204ENST00000547230 DSTYKQ6XUX3 929 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SPOCD1Q6ZMY3 1216 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SPIRE2Q8WWL2 714 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 BICD1Q96G01 975 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ARL8BQ9NVJ2 186 aa13.36□□□□□ -0.27
CACNB3-204ENST00000547230 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms