RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 ARHGAP44Q17R89 818 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
LETMD1-205ENST00000546992 KIAA0319Q5VV43 1072 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 PRSS55Q6UWB4 352 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-205ENST00000546992 RSPO2Q6UXX9 243 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-205ENST00000546992 CEP57Q86XR8 500 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 VPS52Q8N1B4 723 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 NEK11Q8NG66 645 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 POF1BQ8WVV4 589 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 BAP1Q92560 729 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 LRCH3Q96II8 777 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 TTYH1Q9H313 450 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-205ENST00000546992 CYP3A43Q9HB55 503 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 NLRC4Q9NPP4 1024 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 CISHQ9NSE2 258 aa17.46■□□□□ 0.39
LETMD1-205ENST00000546992 REV3LO60673 3130 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 H3BNC9 293 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 TRAPPC3O43617 180 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 TBC1D4O60343 1298 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LPXNO60711 386 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LILRB3O75022 631 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 CILPO75339 1184 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 CSPG5O95196 566 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 P4HA1P13674 534 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 TBXAS1P24557 533 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LMO2P25791 158 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 IRS1P35568 1242 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 DSG1Q02413 1049 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
LETMD1-205ENST00000546992 GPM6BQ13491 265 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 USP41Q3LFD5 358 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 DPH6Q7L8W6 267 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 GPIHBP1Q8IV16 184 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LNX1Q8TBB1 728 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-205ENST00000546992 PIK3R5Q8WYR1 880 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 SHC3Q92529 594 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LPIN3Q9BQK8 851 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 TTPALQ9BTX7 342 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 C11orf84Q9BUA3 381 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-205ENST00000546992 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 DPEP3Q9H4B8 488 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 CEP72Q9P209 647 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 LZTS1Q9Y250 596 aa17.45■□□□□ 0.38
LETMD1-205ENST00000546992 MYH10P35580 1976 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 FSCN2O14926 492 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 ADAM12O43184 909 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 OAZ2O95190 189 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 CALCAP01258 141 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 TPM3P06753 285 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 CTSAP10619 480 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 ACAT1P24752 427 aaKnown RBP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 GLUD2P49448 558 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 MRE11P49959 708 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 FXR1P51114 621 aaKnown RBP eCLIP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 ZNF132P52740 706 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 NDST1P52848 882 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 RAPGEF1Q13905 1077 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 DRAP1Q14919 205 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 PTPN14Q15678 1187 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 FIGNQ5HY92 759 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 E4F1Q66K89 784 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 SPECC1LQ69YQ0 1117 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 OVOS1Q6IE37 1185 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 TMC6Q7Z403 805 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
LETMD1-205ENST00000546992 CNTN6Q9UQ52 1028 aa17.44■□□□□ 0.38
LETMD1-205ENST00000546992 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 PATJQ8NI35 1801 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 F8VZ95 297 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 FOXN3O00409 490 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 C2CD2LO14523 706 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 ATP2C2O75185 946 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 RPL17P18621 184 aaKnown RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 TRIM21P19474 475 aaKnown RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 RFX1P22670 979 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 MFAP3P55082 362 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 KRT17Q04695 432 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 UBE3AQ05086 875 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 GOLGA8FQ08AF8 430 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 GOLGA8DPQ0D2H9 430 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 ENOSF1Q7L5Y1 443 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 OR6B3Q8NGW1 331 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 SPATA18Q8TC71 538 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 PKMYT1Q99640 499 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 ZNF576Q9H609 170 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 TLR9Q9NR96 1032 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 DDX43Q9NXZ2 648 aaKnown RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 MTRRQ9UBK8 725 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 DSEQ9UL01 958 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 BARX2Q9UMQ3 279 aaPredicted RBP17.43■□□□□ 0.38
LETMD1-205ENST00000546992 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
LETMD1-205ENST00000546992 PDGFRBP09619 1106 aa17.42■□□□□ 0.38
LETMD1-205ENST00000546992 FAM163BP0C2L3 166 aa17.42■□□□□ 0.38
LETMD1-205ENST00000546992 OR4Q2P0C623 313 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms