RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 KCNK12Q9HB15 430 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 CDH7Q9ULB5 785 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TRIOO75962 3097 aa17.1■□□□□ 0.33
DDX54-204ENST00000546898 TMEM221A6NGB7 291 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 M0R296 226 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 NR3C1P04150 777 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 RHOP08100 348 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 TWF1Q12792 350 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 TDGQ13569 410 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 NFIL3Q16649 462 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 IQCEQ6IPM2 695 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 CENPPQ6IPU0 288 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 C2orf15Q8WU43 125 aaKnown RBP17.09■□□□□ 0.33
DDX54-204ENST00000546898 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
DDX54-204ENST00000546898 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 MRPS23Q9Y3D9 190 aaKnown RBP17.09■□□□□ 0.33
DDX54-204ENST00000546898 SNX9Q9Y5X1 595 aa17.09■□□□□ 0.33
DDX54-204ENST00000546898 ZDBF2Q9HCK1 2354 aa17.08■□□□□ 0.33
DDX54-204ENST00000546898 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
DDX54-204ENST00000546898 MICAL2O94851 1124 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
DDX54-204ENST00000546898 AP3M2P53677 418 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 MYL7Q01449 175 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 TSPY1Q01534 308 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 DUSP4Q13115 394 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 PNOCQ13519 176 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 SLC39A12Q504Y0 691 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
DDX54-204ENST00000546898 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 SPPL2BQ8TCT7 592 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 FGF13Q92913 245 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 ASIC4Q96FT7 647 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 HPDLQ96IR7 371 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 ZNF512Q96ME7 567 aaPredicted RBP17.08■□□□□ 0.32
DDX54-204ENST00000546898 TMEM209Q96SK2 561 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
DDX54-204ENST00000546898 DUSP12Q9UNI6 340 aa17.08■□□□□ 0.32
DDX54-204ENST00000546898 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 ZNF197O14709 1029 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 MAPK13O15264 365 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 SMC2O95347 1197 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
DDX54-204ENST00000546898 ALDH1A3P47895 512 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 LHX1P48742 406 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
DDX54-204ENST00000546898 EPHB3P54753 998 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 EPHA5P54756 1037 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 CLDN10P78369 228 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 HTR4Q13639 388 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 PRSS36Q5K4E3 855 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 CYP4A22Q5TCH4 519 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 HFE2Q6ZVN8 426 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 MTSS1LQ765P7 747 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 PDZD4Q76G19 769 aaPredicted RBP17.07■□□□□ 0.32
DDX54-204ENST00000546898 NPAS3Q8IXF0 933 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 ELOA2Q8IYF1 753 aaPredicted RBP17.07■□□□□ 0.32
DDX54-204ENST00000546898 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 PARD3BQ8TEW8 1205 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 FAM122AQ96E09 287 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 GSDMAQ96QA5 445 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
DDX54-204ENST00000546898 CRISPLD1Q9H336 500 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 ASAH2Q9NR71 780 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 GDE1Q9NZC3 331 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 CEP72Q9P209 647 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 PTPRDP23468 1912 aa17.07■□□□□ 0.32
DDX54-204ENST00000546898 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 NUP210Q8TEM1 1887 aaPredicted RBP17.06■□□□□ 0.32
DDX54-204ENST00000546898 NR2F2P24468 414 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 ATICP31939 592 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
DDX54-204ENST00000546898 SLC5A9Q2M3M2 681 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 SCARA3Q6AZY7 606 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 LIMS2Q7Z4I7 341 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 ATAD1Q8NBU5 361 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 SPATA20Q8TB22 786 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 DDX43Q9NXZ2 648 aaKnown RBP17.06■□□□□ 0.32
DDX54-204ENST00000546898 HCN4Q9Y3Q4 1203 aa17.06■□□□□ 0.32
DDX54-204ENST00000546898 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 GABRDO14764 452 aa17.05■□□□□ 0.32
DDX54-204ENST00000546898 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 RPL13P26373 211 aaKnown RBP17.05■□□□□ 0.32
DDX54-204ENST00000546898 PCSK1P29120 753 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms