RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 MAFAQ8NHW3 353 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-213ENST00000546820 CYP3A43Q9HB55 503 aa14.75□□□□□ -0.05
PTCH1-213ENST00000546820 MAFFQ9ULX9 164 aa14.75□□□□□ -0.05
PTCH1-213ENST00000546820 L1RE1Q9UN81 338 aa14.75□□□□□ -0.05
PTCH1-213ENST00000546820 CDY1Q9Y6F8 540 aa14.75□□□□□ -0.05
PTCH1-213ENST00000546820 PRRC2BQ5JSZ5 2229 aaKnown RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 CHD7Q9P2D1 2997 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 GLUD1P00367 558 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 ARPP19P56211 112 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 NOP14P78316 857 aaKnown RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 SMARCB1Q12824 385 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 ADAM15Q13444 863 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 NCAPHQ15003 741 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 TPGS2Q68CL5 300 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 SLC8B1Q6J4K2 584 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 GBP6Q6ZN66 633 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 EP400NLQ6ZTU2 488 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 LIMS2Q7Z4I7 341 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 DHX40Q8IX18 779 aaKnown RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 OR6B3Q8NGW1 331 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 ZNF461Q8TAF7 563 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 FAM200AQ8TCP9 573 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 HDAC7Q8WUI4 952 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 CASP10Q92851 521 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 SEMA4DQ92854 862 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 ACBD6Q9BR61 282 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 PI4K2AQ9BTU6 479 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 FAM124BQ9H5Z6 455 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 CBX8Q9HC52 389 aa14.74□□□□□ -0.05
PTCH1-213ENST00000546820 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
PTCH1-213ENST00000546820 MYO7AQ13402 2215 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 GTPBP10A4D1E9 387 aaKnown RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 LRRC10BA6NIK2 292 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 GABRDO14764 452 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 CPB1P15086 417 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 WARSP23381 471 aaKnown RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 TBXAS1P24557 533 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 ELF1P32519 619 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 CLCN4P51793 760 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 ZNF445P59923 1031 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 TSPY1Q01534 308 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 IQCB1Q15051 598 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 FKBP15Q5T1M5 1219 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 SPOPLQ6IQ16 392 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 LLGL2Q6P1M3 1020 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 TMEM184AQ6ZMB5 413 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 RTL10Q7L3V2 364 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 SLC22A17Q8WUG5 538 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 PABPC5Q96DU9 382 aaKnown RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 FAM81BQ96LP2 452 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 NT5C1BQ96P26 610 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 NIF3L1Q9GZT8 377 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 PLEKHA4Q9H4M7 779 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.73□□□□□ -0.051e-16■■■■■ 250
PTCH1-213ENST00000546820 CLDND1Q9NY35 253 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 LIMA1Q9UHB6 759 aaKnown RBP14.73□□□□□ -0.05
PTCH1-213ENST00000546820 POLIQ9UNA4 740 aa14.73□□□□□ -0.05
PTCH1-213ENST00000546820 TRANK1O15050 2925 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 A8MXQ7 604 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 TGM5O43548 720 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 PDGFRBP09619 1106 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 ZNF18P17022 549 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 GTF2F1P35269 517 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCH1-213ENST00000546820 GPR17Q13304 367 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 KRT31Q15323 416 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 MAPRE1Q15691 268 aaKnown RBP14.72□□□□□ -0.05
PTCH1-213ENST00000546820 EXOC3L4Q17RC7 722 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 UVSSAQ2YD98 709 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 FILIP1LQ4L180 1135 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 LILRA6Q6PI73 481 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 RSPO2Q6UXX9 243 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-213ENST00000546820 HLA-CQ95604 372 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 BCO2Q9BYV7 579 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 VPS16Q9H269 839 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 APOBEC3GQ9HC16 384 aaKnown RBP14.72□□□□□ -0.05
PTCH1-213ENST00000546820 DZANK1Q9NVP4 752 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 TAB2Q9NYJ8 693 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 GCNT4Q9P109 453 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 AFF4Q9UHB7 1163 aaKnown RBP14.72□□□□□ -0.05
PTCH1-213ENST00000546820 CDH9Q9ULB4 789 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 COG5Q9UP83 839 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 HCFC2Q9Y5Z7 792 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 VWA8A3KMH1 1905 aa14.72□□□□□ -0.05
PTCH1-213ENST00000546820 ADAM12O43184 909 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 ABLIM3O94929 683 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 WEE2P0C1S8 567 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 ATF2P15336 505 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 HOXB8P17481 243 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 COPB1P53618 953 aaKnown RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 CDH8P55286 799 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 ROR1Q01973 937 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 LRMPQ12912 555 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 NFE2Q16621 373 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 CTC1Q2NKJ3 1217 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 MIIPQ5JXC2 388 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms