RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 EBF3Q9H4W6 596 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 HPS4Q9NQG7 708 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 LOC400499M0QZD8 3231 aa13.11□□□□□ -0.31
BRF1-207ENST00000546417 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
BRF1-207ENST00000546417 OR6C75A6NL08 312 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 ZIC2O95409 532 aaPredicted RBP13.1□□□□□ -0.31
BRF1-207ENST00000546417 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 PSMA5P28066 241 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 CDC25CP30307 473 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 TXKP42681 527 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
BRF1-207ENST00000546417 COL28A1Q2UY09 1125 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 ZNF568Q3ZCX4 644 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 TRIM61Q5EBN2 209 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 USP37Q86T82 979 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 CMTM8Q8IZV2 173 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 C18orf25Q96B23 403 aaPredicted RBP13.1□□□□□ -0.31
BRF1-207ENST00000546417 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 CDT1Q9H211 546 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 FBRSL1Q9HCM7 1045 aaKnown RBP13.1□□□□□ -0.31
BRF1-207ENST00000546417 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 CNTN3Q9P232 1028 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 HSFX1Q9UBD0 423 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 PI4KAP42356 2102 aa13.1□□□□□ -0.31
BRF1-207ENST00000546417 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 M0QZQ0 153 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 AVPR1AP37288 418 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 CYP4F8P98187 520 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 ZNF423Q2M1K9 1284 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 BMP2KLQ5H9B9 411 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
BRF1-207ENST00000546417 PIP4P1Q86T03 277 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 ZNF274Q96GC6 653 aaPredicted RBP13.09□□□□□ -0.31
BRF1-207ENST00000546417 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
BRF1-207ENST00000546417 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
BRF1-207ENST00000546417 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
BRF1-207ENST00000546417 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
BRF1-207ENST00000546417 DENND4CQ5VZ89 1909 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 MTMR11A4FU01 709 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 MCF2P10911 925 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 ENGP17813 658 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 HSPA4P34932 840 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 DPP6P42658 865 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 MAPK8P45983 427 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 SCAPQ12770 1279 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 BFSP1Q12934 665 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 PSMD2Q13200 908 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
BRF1-207ENST00000546417 MYBPC2Q14324 1141 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 PDGFRLQ15198 375 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 TAF12Q16514 161 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.32
BRF1-207ENST00000546417 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 CATSPER3Q86XQ3 398 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 HDDC3Q8N4P3 179 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 KIFAP3Q92845 792 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 KIF9Q9HAQ2 790 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
BRF1-207ENST00000546417 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
BRF1-207ENST00000546417 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 CDKL5O76039 1030 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 ARSAP15289 507 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 BCKDHBP21953 392 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 GJA4P35212 333 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 CPA6Q8N4T0 437 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 TTC9BQ8N6N2 239 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 CD101Q93033 1021 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 CNOT6LQ96LI5 555 aaKnown RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
BRF1-207ENST00000546417 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms