RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 GJC2Q5T442 439 aaPredicted RBP12.43□□□□□ -0.42
CHERP-203ENST00000546361 SLC27A1Q6PCB7 646 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 ATPAF2Q8N5M1 289 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
CHERP-203ENST00000546361 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 RSAD1Q9HA92 442 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
CHERP-203ENST00000546361 SGPL1O95470 568 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 DNAJB2P25686 324 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 CASP2P42575 452 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 NSUN2Q08J23 767 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHERP-203ENST00000546361 HIF1AQ16665 826 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 ACAD10Q6JQN1 1059 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 FRA10AC1Q70Z53 315 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 PGBD3Q8N328 593 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 PDGFDQ9GZP0 370 aaPredicted RBP12.43□□□□□ -0.42
CHERP-203ENST00000546361 ZFATQ9P243 1243 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
CHERP-203ENST00000546361 TYK2P29597 1187 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 OCRLQ01968 901 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
CHERP-203ENST00000546361 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 CCNYL1Q8N7R7 359 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 TTC8Q8TAM2 541 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 RASSF4Q9H2L5 321 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 MRC1P22897 1456 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 CYP11B1P15538 503 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ITGB5P18084 799 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 KCNJ1P48048 391 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
CHERP-203ENST00000546361 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
CHERP-203ENST00000546361 ANO4Q32M45 955 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 PPP1R13LQ8WUF5 828 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 MRPS31Q92665 395 aaKnown RBP12.42□□□□□ -0.42
CHERP-203ENST00000546361 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
CHERP-203ENST00000546361 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHERP-203ENST00000546361 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 CCDC78A2IDD5 438 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 HSPA4LO95757 839 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 MCF2P10911 925 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ATG16L1Q676U5 607 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 FBXO32Q969P5 355 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 FAM118BQ9BPY3 351 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 LRRC1Q9BTT6 524 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 ASB7Q9H672 318 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 KANSL3Q9P2N6 904 aa12.42□□□□□ -0.42
CHERP-203ENST00000546361 H7C4K7 107 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 MSCO60682 206 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 SNX2O60749 519 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 BAG2O95816 211 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 EIF4BP23588 611 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 PTGISQ16647 500 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 CELF3Q5SZQ8 465 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 RNF135Q8IUD6 432 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 RPRD1AQ96P16 312 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 SENP6Q9GZR1 1112 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 NDFIP2Q9NV92 336 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 TFR2Q9UP52 801 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 TTI1O43156 1089 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 ATP9AO75110 1047 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 MMEP08473 750 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 MAPTP10636 758 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 PTPN11Q06124 597 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 BYSLQ13895 437 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 NCAPHQ15003 741 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 CATSPERBQ9H7T0 1116 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 MRFAP1Q9Y605 127 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 GOLGA4Q13439 2230 aaKnown RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 PSMD10O75832 226 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 BRAFP15056 766 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 NCF2P19878 526 aaPredicted RBP12.41□□□□□ -0.42
CHERP-203ENST00000546361 TWF1Q12792 350 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 PDK1Q15118 436 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 HAS1Q92839 578 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 TRAF3IP3Q9Y228 551 aa12.41□□□□□ -0.42
CHERP-203ENST00000546361 CAPN7Q9Y6W3 813 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms