RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TPK1Q9H3S4 243 aa8.31□□□□□ -1.08
UBR1-202ENST00000546274 ARMC7Q9H6L4 198 aa8.31□□□□□ -1.08
UBR1-202ENST00000546274 FAIMQ9NVQ4 179 aa8.31□□□□□ -1.08
UBR1-202ENST00000546274 PTTG2Q9NZH5 202 aa8.31□□□□□ -1.08
UBR1-202ENST00000546274 HEMK1Q9Y5R4 338 aaPredicted RBP8.31□□□□□ -1.08
UBR1-202ENST00000546274 MROH7Q68CQ1 1323 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 TRIM64CA6NLI5 447 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 ZBTB39O15060 712 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 EYA4O95677 639 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 T-ENOLP0DO92 83 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 NMT1P30419 496 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 POLGP54098 1239 aaPredicted RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 DSG1Q02413 1049 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 PPIDQ08752 370 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 THOC5Q13769 683 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 TNIP1Q15025 636 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 NFIL3Q16649 462 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 CBWD6Q4V339 395 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 CBWD3Q5JTY5 395 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 CBWD5Q5RIA9 395 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 DAB2IPQ5VWQ8 1189 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 TATDN1Q6P1N9 297 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 RIN3Q8TB24 985 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 DIS3LQ8TF46 1054 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 HSD17B14Q9BPX1 270 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 PABPC3Q9H361 631 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 ERVK-5Q9HDB9 667 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 KCNQ5Q9NR82 932 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 COG5Q9UP83 839 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 FAM32AQ9Y421 112 aaKnown RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 FADS3Q9Y5Q0 445 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 STAMBPO95630 424 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 HOXA13P31271 388 aaPredicted RBP8.3□□□□□ -1.08
UBR1-202ENST00000546274 SOX5P35711 763 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 LRP8Q14114 963 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 LONRF1Q17RB8 773 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 METTL21CQ5VZV1 264 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 RNF43Q68DV7 783 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 C1orf186Q6ZWK4 172 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 VPS52Q8N1B4 723 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 ARHGEF26Q96DR7 871 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 AMNQ9BXJ7 453 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 EBF3Q9H4W6 596 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 ZDHHC18Q9NUE0 388 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 TAS2R14Q9NYV8 317 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 SNX24Q9Y343 169 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 RABGAP1Q9Y3P9 1069 aa8.3□□□□□ -1.08
UBR1-202ENST00000546274 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBR1-202ENST00000546274 ZNF862O60290 1169 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ECE2O60344 883 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SLITRK3O94933 977 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 FGGP02679 453 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CYP3A4P08684 503 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 HSPA8P11142 646 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 EIF2B2P49770 351 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 TAF1BQ53T94 588 aaPredicted RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 C1orf228Q6PIY5 440 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SYCE1Q8N0S2 351 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 GMCL1P1Q8NEA9 526 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 INPP5DQ92835 1189 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 MAELQ96JY0 434 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 PPP1R10Q96QC0 940 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 SH3GL1Q99961 368 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 WDR18Q9BV38 432 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SLC7A5P2Q9GIP4 190 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 PDGFDQ9GZP0 370 aaPredicted RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 WRAP73Q9P2S5 460 aaPredicted RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 F5H6K3 240 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 MAPK13O15264 365 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ADAM23O75077 832 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 USP1O94782 785 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ALDH2P05091 517 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 TMEM253P0C7T8 217 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ATP6V1B1P15313 513 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ENDOUP21128 410 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 PCSK6P29122 969 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 STAT1P42224 750 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CRKP46108 304 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 FMO5P49326 533 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 PTENP60484 403 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 KLRC3Q07444 240 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CTTNQ14247 550 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 C16orf72Q14CZ0 275 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 PDCD4Q53EL6 469 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 KLHDC10Q6PID8 442 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 FAM186BQ8IYM0 893 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ZDHHC15Q96MV8 337 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 MIPEPQ99797 713 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SYNCQ9H7C4 482 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 USP29Q9HBJ7 922 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 DMAC2Q9NW81 257 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms