RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 FAM71AQ8IYT1 594 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 TOP6BLQ8N6T0 577 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 APPL2Q8NEU8 664 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 SLC20A1Q8WUM9 679 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 CYP3A43Q9HB55 503 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 PCDHB8Q9UN66 801 aa18.19■□□□□ 0.5
CADM1-220ENST00000546000 CILPO75339 1184 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 CSPG5O95196 566 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
CADM1-220ENST00000546000 LMO2P25791 158 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 CTNNB1P35222 781 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 CLCN1P35523 988 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 ALDH7A1P49419 539 aaKnown RBP18.18■□□□□ 0.5
CADM1-220ENST00000546000 PSMC1P62191 440 aaKnown RBP18.18■□□□□ 0.5
CADM1-220ENST00000546000 INCA1Q0VD86 236 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 FAM171A1Q5VUB5 890 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 SLC47A2Q86VL8 602 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 ZNF397Q8NF99 534 aaPredicted RBP18.18■□□□□ 0.5
CADM1-220ENST00000546000 OR6B3Q8NGW1 331 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 IQCDQ96DY2 449 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 ZNF830Q96NB3 372 aaPredicted RBP18.18■□□□□ 0.5
CADM1-220ENST00000546000 KCNF1Q9H3M0 494 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 SF3B1O75533 1304 aaKnown RBP eCLIP18.18■□□□□ 0.5
CADM1-220ENST00000546000 NLRC5Q86WI3 1866 aa18.18■□□□□ 0.5
CADM1-220ENST00000546000 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 PDGFRBP09619 1106 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 BRD2P25440 801 aaKnown RBP18.17■□□□□ 0.5
CADM1-220ENST00000546000 RAD23BP54727 409 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 GSDMDP57764 484 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 KIAA0319Q5VV43 1072 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 TAF3Q5VWG9 929 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 HGSNATQ68CP4 663 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 IRF2BP2Q7Z5L9 587 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 CEP57Q86XR8 500 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 TMEM139Q8IV31 216 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 SLC4A11Q8NBS3 891 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 OR8K1Q8NGG5 319 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 OLIG1Q8TAK6 271 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 CLP1Q92989 425 aaKnown RBP18.17■□□□□ 0.5
CADM1-220ENST00000546000 TMEM209Q96SK2 561 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 CHP1Q99653 195 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 NKX2-4Q9H2Z4 354 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 SNX25Q9H3E2 840 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 BARX2Q9UMQ3 279 aaPredicted RBP18.17■□□□□ 0.5
CADM1-220ENST00000546000 DAAM1Q9Y4D1 1078 aa18.17■□□□□ 0.5
CADM1-220ENST00000546000 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 ATP2C2O75185 946 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 TACC1O75410 805 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 EFEMP2O95967 443 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 CYP11A1P05108 521 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 CFHP08603 1231 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
CADM1-220ENST00000546000 ACOT1Q86TX2 421 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 NOP9Q86U38 636 aaKnown RBP18.16■□□□□ 0.5
CADM1-220ENST00000546000 OR10T2Q8NGX3 314 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 TFAP2BQ92481 460 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 FAXDC2Q96IV6 333 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 FAM81BQ96LP2 452 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 ZSWIM1Q9BR11 485 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 PBX4Q9BYU1 374 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 DDX43Q9NXZ2 648 aaKnown RBP18.16■□□□□ 0.5
CADM1-220ENST00000546000 SPG21Q9NZD8 308 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 ARHGAP20Q9P2F6 1191 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 PUF60Q9UHX1 559 aaKnown RBP18.16■□□□□ 0.5
CADM1-220ENST00000546000 MYO6Q9UM54 1294 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 CNTN6Q9UQ52 1028 aa18.16■□□□□ 0.5
CADM1-220ENST00000546000 SOWAHDA6NJG2 315 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 A8MXQ7 604 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 GABRDO14764 452 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 FGF18O76093 207 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 OR4Q2P0C623 313 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 FERP16591 822 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 FGFR3P22607 806 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 YWHAEP62258 255 aaKnown RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 MTF1Q14872 753 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 MEA1Q16626 185 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 VARS2Q5ST30 1063 aaKnown RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 OVOS1Q6IE37 1185 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 PRSS55Q6UWB4 352 aaPredicted RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 RNF168Q8IYW5 571 aaPredicted RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 TDHQ8IZJ6 230 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 KLHL23Q8NBE8 558 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 EPS8L1Q8TE68 723 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 AUTS2Q8WXX7 1259 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 JAKMIP2Q96AA8 810 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 TMEM169Q96HH4 297 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 PANX2Q96RD6 677 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 HERC2P3Q9BVR0 1158 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 PRO3102Q9H379 93 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 FAM49BQ9NUQ9 324 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
CADM1-220ENST00000546000 NOCTQ9UK39 431 aaKnown RBP18.15■□□□□ 0.5
CADM1-220ENST00000546000 STXBP5LQ9Y2K9 1186 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms